DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17770 and calm1a

DIOPT Version :10

Sequence 1:NP_651432.1 Gene:CG17770 / 43118 FlyBaseID:FBgn0039374 Length:164 Species:Drosophila melanogaster
Sequence 2:NP_998516.1 Gene:calm1a / 406660 ZFINID:ZDB-GENE-030131-8308 Length:149 Species:Danio rerio


Alignment Length:143 Identity:65/143 - (45%)
Similarity:100/143 - (69%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LTEEQVKDLEIAFSLFDDQDTKVIPITNLRQLMLSVAHYPSDMELQEIQAEIDADGSGELYLSDF 84
            |||||:.:.:.||||||......|....|..:|.|:...|::.|||::..|:||||:|.:...:|
Zfish     5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69

  Fly    85 LHIMSQRYANMSTEDEIIAAFRVFDKEGTGLISESEFRHIMQNMGEQLTDDEVEEIIRDANSDLE 149
            |.:|:::..:..:|:||..|||||||:|.|.||.:|.||:|.|:||:|||:||:|:||:|:.|.:
Zfish    70 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 134

  Fly   150 GNIDYVRFVRMMS 162
            |.::|..||:||:
Zfish   135 GQVNYEEFVQMMT 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17770NP_651432.1 PTZ00184 19..161 CDD:185504 63/140 (45%)
calm1aNP_998516.1 PTZ00184 1..149 CDD:185504 65/143 (45%)

Return to query results.
Submit another query.