DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17770 and cmd-1

DIOPT Version :10

Sequence 1:NP_651432.1 Gene:CG17770 / 43118 FlyBaseID:FBgn0039374 Length:164 Species:Drosophila melanogaster
Sequence 2:NP_503386.1 Gene:cmd-1 / 178614 WormBaseID:WBGene00000552 Length:149 Species:Caenorhabditis elegans


Alignment Length:144 Identity:66/144 - (45%)
Similarity:100/144 - (69%) Gaps:0/144 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LTEEQVKDLEIAFSLFDDQDTKVIPITNLRQLMLSVAHYPSDMELQEIQAEIDADGSGELYLSDF 84
            |||||:.:.:.||||||......|....|..:|.|:...|::.|||::..|:||||:|.:...:|
 Worm     5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69

  Fly    85 LHIMSQRYANMSTEDEIIAAFRVFDKEGTGLISESEFRHIMQNMGEQLTDDEVEEIIRDANSDLE 149
            |.:|:::..:..:|:||..|||||||:|.|.||.:|.||:|.|:||:|||:||:|:||:|:.|.:
 Worm    70 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 134

  Fly   150 GNIDYVRFVRMMST 163
            |.::|..||.||:|
 Worm   135 GQVNYEEFVTMMTT 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17770NP_651432.1 PTZ00184 19..161 CDD:185504 63/140 (45%)
cmd-1NP_503386.1 PTZ00184 1..149 CDD:185504 66/144 (46%)

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