DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5024 and CAM4

DIOPT Version :10

Sequence 1:NP_651431.1 Gene:CG5024 / 43117 FlyBaseID:FBgn0039373 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_001185330.1 Gene:CAM4 / 842959 AraportID:AT1G66410 Length:159 Species:Arabidopsis thaliana


Alignment Length:153 Identity:61/153 - (39%)
Similarity:96/153 - (62%) Gaps:10/153 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LNDEQLKDCEAAFALFD----------DDNAKVIPIKLLRDCLRAVAHNPPENEIQDYITEIDTD 75
            |.|||:.:.:.||:|||          .|:...|..|.|...:|::..||.|.|:||.|.|:|.|
plant     5 LTDEQISEFKEAFSLFDKDGDDSISDSGDSCGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 69

  Fly    76 GSGELYLSDFLYIMSKRYENLTVEDEVILAFKVFDKDGSGFIHENEFRQIMTEYGDEMEEDEIEE 140
            |:|.:...:||.:|:|:.::...|:|:..||:|||||.:|||...|.|.:||..|:::.::|:||
plant    70 GNGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEE 134

  Fly   141 MIRDADANTELKIDYVRFVTMMM 163
            |||:||.:.:.:|:|..||.:||
plant   135 MIREADVDGDGQINYEEFVKIMM 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5024NP_651431.1 PTZ00184 21..163 CDD:185504 59/151 (39%)
CAM4NP_001185330.1 PTZ00184 1..159 CDD:185504 61/153 (40%)

Return to query results.
Submit another query.