DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5024 and Myl6

DIOPT Version :9

Sequence 1:NP_001163736.1 Gene:CG5024 / 43117 FlyBaseID:FBgn0039373 Length:165 Species:Drosophila melanogaster
Sequence 2:XP_008763261.1 Gene:Myl6 / 685867 RGDID:1589019 Length:152 Species:Rattus norvegicus


Alignment Length:126 Identity:35/126 - (27%)
Similarity:60/126 - (47%) Gaps:8/126 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DEQLKDCEAAFALFDDDNAKVIPIKLLRDCLRAVAHNPPENEIQDYITEIDTDGSGELYLSDF-- 85
            ::|..:.:.||.|||......|......|.:||:..||...|:...:....:|......| ||  
  Rat     6 EDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEMNVKVL-DFEH 69

  Fly    86 ----LYIMSKRYENLTVEDEVILAFKVFDKDGSGFIHENEFRQIMTEYGDEMEEDEIEEMI 142
                |..::|..:..|.|| .:...:||||:|:|.:...|.|.::...|::|.|:|:|.::
  Rat    70 FLPMLQTVAKNKDQGTYED-YVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEMLV 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5024NP_001163736.1 PTZ00184 21..163 CDD:185504 35/126 (28%)
EFh 28..90 CDD:298682 17/67 (25%)
EFh 64..127 CDD:238008 18/68 (26%)
EFh 101..163 CDD:298682 13/42 (31%)
Myl6XP_008763261.1 PTZ00184 5..142 CDD:185504 35/126 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1470794at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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