DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5024 and myl4

DIOPT Version :9

Sequence 1:NP_001163736.1 Gene:CG5024 / 43117 FlyBaseID:FBgn0039373 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_001020354.1 Gene:myl4 / 574004 ZFINID:ZDB-GENE-050626-112 Length:187 Species:Danio rerio


Alignment Length:175 Identity:47/175 - (26%)
Similarity:83/175 - (47%) Gaps:24/175 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SPPPE----------VRTVHTHTLNDEQLKDCEAAFALFDDDNAKVIPIKLLR--DCLRAVAHNP 60
            :||||          ::::......| |:::.:..|.|||...|..:.|...:  |.:||:..||
Zfish    16 APPPEPEKPKEPQFDLKSIKVGFTAD-QIEEFKETFMLFDRTPASEMKITYAQCGDVMRALGLNP 79

  Fly    61 PENEIQDYI-----TEIDTDG-SGELYLSDFLYIMSKRYENLTVEDEVILAFKVFDKDGSGFIHE 119
            ...|:...:     .|::|.. ..|.:|..|.:: |:..:..|.|| .:...:||||:|:|.:..
Zfish    80 TNAEVLKVLGKPRPEEMNTKMIDFETFLPMFQHV-SRSKDQGTFED-FVEGLRVFDKEGNGTVMG 142

  Fly   120 NEFRQIMTEYGDEMEEDEIEE-MIRDADANTELKIDYVRFVTMMM 163
            .|.|.::...|::|.|.|:|: |....|.|.  .::|..||..:|
Zfish   143 AELRHVLATLGEKMTESEVEQLMAGQEDGNG--CVNYEAFVKHIM 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5024NP_001163736.1 PTZ00184 21..163 CDD:185504 42/150 (28%)
EFh 28..90 CDD:298682 17/69 (25%)
EFh 64..127 CDD:238008 18/68 (26%)
EFh 101..163 CDD:298682 19/62 (31%)
myl4NP_001020354.1 PTZ00184 39..186 CDD:185504 43/152 (28%)
EFh 124..185 CDD:238008 20/63 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1470794at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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