DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5024 and Myl1

DIOPT Version :10

Sequence 1:NP_651431.1 Gene:CG5024 / 43117 FlyBaseID:FBgn0039373 Length:165 Species:Drosophila melanogaster
Sequence 2:XP_008765516.1 Gene:Myl1 / 56781 RGDID:1598796 Length:212 Species:Rattus norvegicus


Alignment Length:164 Identity:45/164 - (27%)
Similarity:78/164 - (47%) Gaps:13/164 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PPEVRTVHTHT----LNDEQLKDCEAAFALFDDDNAKVIPIKLLRDCLRAVAHNPPENEIQDYIT 70
            |.||.:||:..    ...|...:.:.||.|||......|.:..:.|.|||:..||...|::..:.
  Rat    50 PLEVSSVHSPVPLLFCLPELHHEFKEAFLLFDRTGECKITLSQVGDVLRALGTNPTNAEVKKVLG 114

  Fly    71 EIDTD--GSGELYLSDFLYIM---SKRYENLTVEDEVILAFKVFDKDGSGFIHENEFRQIMTEYG 130
            ....:  .:.::....||.:|   |...:....|| .:...:||||:|:|.:...|.|.::...|
  Rat   115 NPSNEEMNAKKIEFEQFLPMMQAISNNKDQGGYED-FVEGLRVFDKEGNGTVMGAELRHVLATLG 178

  Fly   131 DEMEEDEIEEMIR-DADANTELKIDYVRFVTMMM 163
            ::|:|:|:|.::. ..|:|.  .|:|..||..:|
  Rat   179 EKMKEEEVEALLAGQEDSNG--CINYEAFVKHIM 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5024NP_651431.1 PTZ00184 21..163 CDD:185504 39/147 (27%)
Myl1XP_008765516.1 PTZ00184 72..211 CDD:185504 39/142 (27%)

Return to query results.
Submit another query.