DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5024 and myl1

DIOPT Version :10

Sequence 1:NP_651431.1 Gene:CG5024 / 43117 FlyBaseID:FBgn0039373 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_988954.1 Gene:myl1 / 394551 XenbaseID:XB-GENE-970333 Length:190 Species:Xenopus tropicalis


Alignment Length:166 Identity:45/166 - (27%)
Similarity:77/166 - (46%) Gaps:17/166 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDFSSPPPEVRTVHTHTLNDEQLKDCEAAFALFDDDNAKVIPIKLLRDCLRAVAHNPPENEIQDY 68
            ||.||...|        .:.:|..|.:.||.|||......|.:..:.|.:||:..||...|::..
 Frog    34 FDLSSVKIE--------FSQDQQDDFKEAFLLFDRTGDSKIALNQVADVMRALGQNPTNAEVKKV 90

  Fly    69 ITEIDTD--GSGELYLSDFLYIMSKRYENL---TVEDEVILAFKVFDKDGSGFIHENEFRQIMTE 128
            :.....:  .:.::....||.:|.....|.   :.|| .:...:||||:|:|.:...|.|.::..
 Frog    91 LGNPSAEEMNAKKIEFEQFLPMMQAVANNKDQGSFED-FVEGLRVFDKEGNGTVMGAELRHVLAT 154

  Fly   129 YGDEMEEDEIEEMIR-DADANTELKIDYVRFVTMMM 163
            .|::|.|:|:|.::. ..|:|.  .|:|..||..:|
 Frog   155 LGEKMREEEVEALLAGQEDSNG--CINYEAFVKHIM 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5024NP_651431.1 PTZ00184 21..163 CDD:185504 39/147 (27%)
myl1NP_988954.1 PTZ00184 41..189 CDD:185504 41/159 (26%)

Return to query results.
Submit another query.