DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5024 and myl13

DIOPT Version :9

Sequence 1:NP_001163736.1 Gene:CG5024 / 43117 FlyBaseID:FBgn0039373 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_956810.1 Gene:myl13 / 393488 ZFINID:ZDB-GENE-040426-1593 Length:186 Species:Danio rerio


Alignment Length:174 Identity:52/174 - (29%)
Similarity:78/174 - (44%) Gaps:30/174 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PP--PEVRTVHTH-TLNDEQLKDCEAAFALFD--DDNAKVIPIKLLRDCLRAVAHNPPENEI--- 65
            ||  ||....... ....||::|.:.||.|||  ..|...|......|.:||:..||...|:   
Zfish    22 PPKEPEFNAAEVQIEFTAEQIEDFKDAFQLFDRTPTNEMKITFAQCGDLIRALGQNPTNAEVLHV 86

  Fly    66 ------QD-YITEIDTDGSGELYLSDFLYI---MSKRYENLTVEDEVILAFKVFDKDGSGFIHEN 120
                  :| .:..:|.|        .||.:   :.|..:..|.|| .:...:||||:|:|.:...
Zfish    87 LGKPKPEDMQVKMLDFD--------QFLPMHQHICKAKDRGTFED-FVEGLRVFDKEGNGTVMGA 142

  Fly   121 EFRQIMTEYGDEMEEDEIEE-MIRDADANTELKIDYVRFVTMMM 163
            |.|.::...|::|:|||:|: |....|||.  .|:|..||..:|
Zfish   143 ELRHVLATLGEKMKEDEVEQLMAGQEDANG--CINYEAFVKHIM 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5024NP_001163736.1 PTZ00184 21..163 CDD:185504 47/157 (30%)
EFh 28..90 CDD:298682 19/76 (25%)
EFh 64..127 CDD:238008 18/75 (24%)
EFh 101..163 CDD:298682 22/62 (35%)
myl13NP_956810.1 PTZ00184 34..185 CDD:185504 48/162 (30%)
EFh 123..184 CDD:238008 23/63 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1470794at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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