DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5024 and RGD1559821

DIOPT Version :9

Sequence 1:NP_001163736.1 Gene:CG5024 / 43117 FlyBaseID:FBgn0039373 Length:165 Species:Drosophila melanogaster
Sequence 2:XP_006249352.1 Gene:RGD1559821 / 304447 RGDID:1559821 Length:151 Species:Rattus norvegicus


Alignment Length:151 Identity:42/151 - (27%)
Similarity:73/151 - (48%) Gaps:17/151 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DEQLKDCEAAFALFD-DDNAKVIPIKLLRDCLRAVAHNPPENEIQDYITEIDTDGSGELYLS--D 84
            ::|..:.:.||.||| ..|.|:: .....|.:||:..||...|:   :..:....|.|:.:.  |
  Rat     6 EDQTTEFKEAFQLFDRTGNGKIL-YSQCGDVMRALGQNPTNTEV---LKVLGNPKSDEMNVEVLD 66

  Fly    85 F------LYIMSKRYENLTVEDEVILAFKVFDKDGSGFIHENEFRQIMTEYGDEMEEDEIEEMIR 143
            |      |..::|..:..|.|| .:....||||:|:..:...|.|.|:...|:.|.|:|:|.::.
  Rat    67 FEHFLPMLQTVAKSKDQGTYED-YVEGLHVFDKEGNSAVLGAEIRHILVTLGENMTEEEVEMLVA 130

  Fly   144 -DADANTELKIDYVRFVTMMM 163
             ..|:|:  .|:|...|.|::
  Rat   131 GHEDSNS--CINYEELVRMVL 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5024NP_001163736.1 PTZ00184 21..163 CDD:185504 42/149 (28%)
EFh 28..90 CDD:298682 18/70 (26%)
EFh 64..127 CDD:238008 18/70 (26%)
EFh 101..163 CDD:298682 19/62 (31%)
RGD1559821XP_006249352.1 PTZ00184 5..149 CDD:185504 42/149 (28%)
EFh 11..75 CDD:298682 17/67 (25%)
EFh 11..39 CDD:197492 9/28 (32%)
EFh 94..148 CDD:298682 18/55 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1470794at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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