DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5024 and Tnnc1

DIOPT Version :9

Sequence 1:NP_001163736.1 Gene:CG5024 / 43117 FlyBaseID:FBgn0039373 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_001029277.1 Gene:Tnnc1 / 290561 RGDID:1309921 Length:161 Species:Rattus norvegicus


Alignment Length:148 Identity:49/148 - (33%)
Similarity:85/148 - (57%) Gaps:8/148 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LNDEQLKDCEAAFALF---DDDNAKVIPIKLLRDCLRAVAHNPPENEIQDYITEIDTDGSGELYL 82
            |.:||..:.:|||.:|   .:|..  |..|.|...:|.:..||...|:|:.|.|:|.||||.:..
  Rat    12 LTEEQKNEFKAAFDIFVLGAEDGC--ISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74

  Fly    83 SDFLYIMSKRYENLT---VEDEVILAFKVFDKDGSGFIHENEFRQIMTEYGDEMEEDEIEEMIRD 144
            .:||.:|.:..::.:   .|:|:...|::|||:..|:|..:|.:.::...|:.:.||:|||:::|
  Rat    75 DEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKMMLQATGETITEDDIEELMKD 139

  Fly   145 ADANTELKIDYVRFVTMM 162
            .|.|.:.:|||..|:..|
  Rat   140 GDKNNDGRIDYDEFLEFM 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5024NP_001163736.1 PTZ00184 21..163 CDD:185504 49/148 (33%)
EFh 28..90 CDD:298682 22/64 (34%)
EFh 64..127 CDD:238008 21/65 (32%)
EFh 101..163 CDD:298682 22/62 (35%)
Tnnc1NP_001029277.1 PTZ00184 9..157 CDD:185504 48/146 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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