DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5024 and mlc-6

DIOPT Version :9

Sequence 1:NP_001163736.1 Gene:CG5024 / 43117 FlyBaseID:FBgn0039373 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_510375.2 Gene:mlc-6 / 186979 WormBaseID:WBGene00010554 Length:143 Species:Caenorhabditis elegans


Alignment Length:144 Identity:38/144 - (26%)
Similarity:75/144 - (52%) Gaps:8/144 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 EQLKDCEAAFALFDDDNAKVIPIKLLRDCLRAVAHNPPENEIQDYITEIDTDGSGELYLSDFLYI 88
            :.:::|...|.|||......|....:.:.||::..||..:::...:.:.|.  :..:...:||.:
 Worm     5 DNMEECREVFMLFDKKGDGKIDAAQVFEVLRSLDENPKNSDVHQCLAKFDK--TARISFENFLPV 67

  Fly    89 MSKRYEN---LTVEDEVILAFKVFDKDGSGFIHENEFRQIMTEYGDEMEEDEIEEMIRDADANTE 150
            :|....|   .::|| .|.....|||:|.|||...|.||::|..||::.::|.::::...:.|.:
 Worm    68 LSHVRNNKIPYSMED-FIKGLSHFDKEGEGFITSAELRQVLTTMGDKLSDEEFDKLVAGQEDNGK 131

  Fly   151 LKIDYVRFVTMMME 164
            :||:  .||..:|:
 Worm   132 IKIE--TFVKTIMQ 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5024NP_001163736.1 PTZ00184 21..163 CDD:185504 37/141 (26%)
EFh 28..90 CDD:298682 13/61 (21%)
EFh 64..127 CDD:238008 18/65 (28%)
EFh 101..163 CDD:298682 20/61 (33%)
mlc-6NP_510375.2 PTZ00184 5..143 CDD:185504 37/142 (26%)
EFh 9..65 CDD:238008 11/57 (19%)
EFh 82..142 CDD:298682 21/62 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1470794at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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