DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4960 and REEP6

DIOPT Version :10

Sequence 1:NP_651429.1 Gene:CG4960 / 43115 FlyBaseID:FBgn0039371 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001316485.1 Gene:REEP6 / 92840 HGNCID:30078 Length:211 Species:Homo sapiens


Alignment Length:172 Identity:69/172 - (40%)
Similarity:104/172 - (60%) Gaps:12/172 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NGYKQDINRSLRDASKPWTKAFDSLEEKTGVERVNIFVGSILFCAFYLVFGWCAQLLCNIIGVLY 77
            :|.:|.:...|...:.. |:...:||.|||||:..:..|::...:.||:||:.|.||||:||.:|
Human     2 DGLRQRVEHFLEQRNLV-TEVLGALEAKTGVEKRYLAAGAVTLLSLYLLFGYGASLLCNLIGFVY 65

  Fly    78 PAYISIHGIESSTKQDDIRWLIYWVTFGIFTVIEFYPSLLTSMIPFYWLLKCTFLIWCMLPTERN 142
            |||.||..|||.:|.||..||.|||.:.:|.:.||:..||.|..|||::.||.||::||.|...|
Human    66 PAYASIKAIESPSKDDDTVWLTYWVVYALFGLAEFFSDLLLSWFPFYYVGKCAFLLFCMAPRPWN 130

  Fly   143 GSTLIYHKLVRPYFLKLHDPVDMM-----------SAGVPKD 173
            |:.::|.::|||.||:.|..||.:           :||:.::
Human   131 GALMLYQRVVRPLFLRHHGAVDRIMNDLSGRALDAAAGITRN 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4960NP_651429.1 TB2_DP1_HVA22 78..155 CDD:460820 37/76 (49%)
REEP6NP_001316485.1 TB2_DP1_HVA22 66..143 CDD:460820 37/76 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..211
Blue background indicates that the domain is not in the aligned region.

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