DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4960 and HVA22H

DIOPT Version :9

Sequence 1:NP_001287533.1 Gene:CG4960 / 43115 FlyBaseID:FBgn0039371 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_564100.1 Gene:HVA22H / 838584 AraportID:AT1G19950 Length:315 Species:Arabidopsis thaliana


Alignment Length:117 Identity:33/117 - (28%)
Similarity:49/117 - (41%) Gaps:14/117 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 VGSILFCAFYLVFGWCAQLLCNIIGVLYPAYISIHGIE-SSTKQDDIR-WLIYWVTFGIFTVIEF 112
            :||.|.....:|||:.           ||||.....:| :..:...:| |..||:.....|:.|.
plant     2 IGSFLTRGLVMVFGYA-----------YPAYECYKAVEKNKPEMQQLRFWCQYWILVAALTIFER 55

  Fly   113 YPSLLTSMIPFYWLLKCTFLIWCMLPTERNGSTLIYHKLVRPYFLKLHDPVD 164
            ....|.|.:|.|...|..|.|:...|..| |:|.:|....:||..|..:.:|
plant    56 VGDALASWVPLYCEAKLAFFIYLWFPKTR-GTTYVYDSFFQPYVAKHENEID 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4960NP_001287533.1 TB2_DP1_HVA22 66..154 CDD:281172 23/89 (26%)
HVA22HNP_564100.1 TB2_DP1_HVA22 7..96 CDD:281172 26/100 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1473891at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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