DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4960 and AT5G42560

DIOPT Version :9

Sequence 1:NP_001287533.1 Gene:CG4960 / 43115 FlyBaseID:FBgn0039371 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_568606.1 Gene:AT5G42560 / 834262 AraportID:AT5G42560 Length:296 Species:Arabidopsis thaliana


Alignment Length:98 Identity:29/98 - (29%)
Similarity:44/98 - (44%) Gaps:3/98 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LCNIIGVLYPAYISIHGIESSTKQ-DDIR-WLIYWVTFGIFTVIEFYPSLLTSMIPFYWLLKCTF 131
            |..::|..||||.....:|.:..: :.:| |..||:.....||.|.......|.:|.|...|..|
plant    10 LVMVLGYAYPAYECYKTVEKNRPEIEQLRFWCQYWILVACLTVFERVGDAFVSWVPMYSEAKLAF 74

  Fly   132 LIWCMLPTERNGSTLIYHKLVRPYFLKLHDPVD 164
            .|:...|..| |:|.:|....|||..:..:.:|
plant    75 FIYLWYPKTR-GTTYVYESFFRPYLSQHENDID 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4960NP_001287533.1 TB2_DP1_HVA22 66..154 CDD:281172 25/86 (29%)
AT5G42560NP_568606.1 TB2_DP1_HVA22 19..97 CDD:397309 23/78 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1473891at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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