DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4960 and HVA22F

DIOPT Version :9

Sequence 1:NP_001287533.1 Gene:CG4960 / 43115 FlyBaseID:FBgn0039371 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_181810.2 Gene:HVA22F / 818882 AraportID:AT2G42820 Length:158 Species:Arabidopsis thaliana


Alignment Length:81 Identity:31/81 - (38%)
Similarity:45/81 - (55%) Gaps:1/81 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 VLYPAYISIHGIESSTKQDDIRWLIYWVTFGIFTVIEFYPSLLTSMIPFYWLLKCTFLIWCMLPT 139
            :|||.|.|...|||.|..||.:||.||:.:.:.|:.|.....:.:.:||:..||..|.:|.:||.
plant    21 LLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSVWRVLAWLPFWPYLKLLFCMWLVLPM 85

  Fly   140 ERNGSTLIYHKLVRPY 155
             .:|:..||...||.|
plant    86 -FSGAAYIYSNFVRQY 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4960NP_001287533.1 TB2_DP1_HVA22 66..154 CDD:281172 29/78 (37%)
HVA22FNP_181810.2 TB2_DP1_HVA22 24..100 CDD:397309 28/76 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5052
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 75 1.000 Inparanoid score I2421
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1473891at2759
OrthoFinder 1 1.000 - - FOG0000849
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100903
Panther 1 1.100 - - O PTHR12300
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X536
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.870

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