DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4960 and reep3a

DIOPT Version :10

Sequence 1:NP_651429.1 Gene:CG4960 / 43115 FlyBaseID:FBgn0039371 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001032664.2 Gene:reep3a / 641577 ZFINID:ZDB-GENE-051127-47 Length:249 Species:Danio rerio


Alignment Length:99 Identity:31/99 - (31%)
Similarity:56/99 - (56%) Gaps:1/99 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 AQLLCNIIGVLYPAYISIHGIESSTKQDDIRWLIYWVTFGIFTVIEFYPSLLTSMIPFYWLLKCT 130
            ::::..:.|.|||||.|...::|...::.:||::||:.|.::||:|....|..:..|.|:.||..
Zfish     7 SRVIVLVFGTLYPAYYSFKAVKSKNVKEYVRWMMYWIVFALYTVVETITDLSLAWFPVYYELKMA 71

  Fly   131 FLIWCMLPTERNGSTLIYHKLVRPYFLKLHDPVD 164
            |:.|.:.|..| |:::||.|.:.|........:|
Zfish    72 FVFWLLSPYTR-GASVIYRKFLHPMLASKEREID 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4960NP_651429.1 TB2_DP1_HVA22 78..155 CDD:460820 26/76 (34%)
reep3aNP_001032664.2 TB2_DP1_HVA22 19..95 CDD:460820 26/76 (34%)

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