DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4960 and reep2

DIOPT Version :10

Sequence 1:NP_651429.1 Gene:CG4960 / 43115 FlyBaseID:FBgn0039371 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001025398.1 Gene:reep2 / 568927 ZFINID:ZDB-GENE-050706-125 Length:268 Species:Danio rerio


Alignment Length:81 Identity:31/81 - (38%)
Similarity:50/81 - (61%) Gaps:1/81 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 GVLYPAYISIHGIESSTKQDDIRWLIYWVTFGIFTVIEFYPSLLTSMIPFYWLLKCTFLIWCMLP 138
            |.|||||.|...:::...::.::|::||:.|.:||..|....:|.|..|||:.||..|:||.:.|
Zfish    15 GTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFALFTTAETITDMLLSWFPFYFELKIAFVIWLLSP 79

  Fly   139 TERNGSTLIYHKLVRP 154
            ..: ||:::|.|.|.|
Zfish    80 YTK-GSSVLYRKFVHP 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4960NP_651429.1 TB2_DP1_HVA22 78..155 CDD:460820 28/77 (36%)
reep2NP_001025398.1 TB2_DP1_HVA22 19..94 CDD:460820 27/75 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..268
Blue background indicates that the domain is not in the aligned region.

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