DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4960 and F56B3.6

DIOPT Version :10

Sequence 1:NP_651429.1 Gene:CG4960 / 43115 FlyBaseID:FBgn0039371 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_499990.1 Gene:F56B3.6 / 176906 WormBaseID:WBGene00018930 Length:205 Species:Caenorhabditis elegans


Alignment Length:126 Identity:46/126 - (36%)
Similarity:70/126 - (55%) Gaps:1/126 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 EKTGVERVNIFVGSILFCAFYLVFGWCAQLLCNIIGVLYPAYISIHGIESSTKQDDIRWLIYWVT 103
            |..|.:|.::...:....||:||||..|:||||:||..||.|.|:..|.|....||..|||||..
 Worm    73 ESAGFKRDHLSYAAFGLIAFFLVFGSVARLLCNLIGFGYPTYASVKAIRSPGGDDDTVWLIYWTC 137

  Fly   104 FGIFTVIEFYPSLLTSMIPFYWLLKCTFLIWCMLPTERNGSTLIYHKLVRPYFLKLHDPVD 164
            |.:..:::|:...:.|..|||::.|..||::..|| :..||.:.|..:|.|..:.:...:|
 Worm   138 FAVLYLVDFFSEAILSWFPFYYIAKACFLVYLYLP-QTQGSVMFYETIVDPLVIFVDKNLD 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4960NP_651429.1 TB2_DP1_HVA22 78..155 CDD:460820 27/76 (36%)
F56B3.6NP_499990.1 TB2_DP1_HVA22 112..188 CDD:460820 27/76 (36%)

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