DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4960 and C06E1.1

DIOPT Version :10

Sequence 1:NP_651429.1 Gene:CG4960 / 43115 FlyBaseID:FBgn0039371 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_498893.1 Gene:C06E1.1 / 176205 WormBaseID:WBGene00015518 Length:161 Species:Caenorhabditis elegans


Alignment Length:130 Identity:31/130 - (23%)
Similarity:62/130 - (47%) Gaps:13/130 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAAQVSQVQRFFNGYKQDINRSLRDASKPW-TKAFDSLEEKTGVERVNIFVGSILFCAFYLVFGW 64
            ||..:::::...|.|.:..|:      :.| .|.|...|:.:|:.|..|...:.|..:.|::.|.
 Worm     1 MATIIAKIESKINEYLKARNK------EDWKEKTFTQAEKFSGIPRERIVSMAFLMLSIYVLLGN 59

  Fly    65 CAQLLCNIIGVLYPAYISIHGI-ESSTKQDDIRWLIYWVTFGIFTVIEFYPSLLTSMIPFYWLLK 128
            ...|..:||.:.:|...|...: :.....|:|  |:||:.:.:.::.::  |.|.. :|||:..|
 Worm    60 FLPLFSHIICIFWPVKESFMILRQQKNPSDNI--LLYWILYAMVSLFDY--SALPG-VPFYYFAK 119

  Fly   129  128
             Worm   120  119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4960NP_651429.1 TB2_DP1_HVA22 78..155 CDD:460820 13/52 (25%)
C06E1.1NP_498893.1 TB2_DP1_HVA22 73..>124 CDD:460820 13/52 (25%)

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