DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4960 and reep3

DIOPT Version :10

Sequence 1:NP_651429.1 Gene:CG4960 / 43115 FlyBaseID:FBgn0039371 Length:174 Species:Drosophila melanogaster
Sequence 2:XP_002940797.3 Gene:reep3 / 100487120 XenbaseID:XB-GENE-958749 Length:255 Species:Xenopus tropicalis


Alignment Length:105 Identity:34/105 - (32%)
Similarity:58/105 - (55%) Gaps:1/105 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LVFGWCAQLLCNIIGVLYPAYISIHGIESSTKQDDIRWLIYWVTFGIFTVIEFYPSLLTSMIPFY 124
            :|.|...:.:..:.|:|||||.|...:.:...::.:||::||:.|.|:||:|....|..|..|.|
 Frog     1 MVSGIICKAVVLVFGMLYPAYYSYKAVRTKNVKEYVRWMMYWIVFAIYTVMETIADLTISWFPLY 65

  Fly   125 WLLKCTFLIWCMLPTERNGSTLIYHKLVRPYFLKLHDPVD 164
            :.||..|::|.:.|..| |::|:|.|.:.|........:|
 Frog    66 YELKIAFVVWLLSPYTR-GASLLYRKFLHPLLSSKEKEID 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4960NP_651429.1 TB2_DP1_HVA22 78..155 CDD:460820 27/76 (36%)
reep3XP_002940797.3 TB2_DP1_HVA22 19..95 CDD:460820 27/76 (36%)

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