DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4956 and AT3G18620

DIOPT Version :9

Sequence 1:NP_651428.2 Gene:CG4956 / 43114 FlyBaseID:FBgn0039370 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_188492.2 Gene:AT3G18620 / 821393 AraportID:AT3G18620 Length:345 Species:Arabidopsis thaliana


Alignment Length:307 Identity:74/307 - (24%)
Similarity:129/307 - (42%) Gaps:59/307 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CGW----SRRMCFRAEEGFHRHFQLHRIK----VMGLLHPFCAIFLLCLI--GLLFVYELCYVLP 66
            |||    :.:...|.|.   :.|.|.|.:    |:.|     |:|:|.:|  |:...|.   ||.
plant    39 CGWCGAITNQNPVRPET---KSFGLRRFRDRCFVVIL-----AVFMLFVICGGIWAAYP---VLF 92

  Fly    67 QITDPHGIWHKLCWFMGIYTVINILGNWWLGCMTNTSVDSLVLERQYPVAGEAHLWHY--CSTCQ 129
            .|:...||:|.:   ......|:.|..:.|.........:.:|...:|..|...|.:|  |:.|.
plant    93 SISLACGIFHSV---TTATLAISTLSTFILVAFKCAGKPTNILYGTHPGVGNGALNNYTFCNYCS 154

  Fly   130 KLVPPRSWHCSLCNICILKRDHHCTFFASCIGHKNQRYFLAFLFHLSFGSGQALVYNGILNWTNK 194
            |...||:.||..|.:|:|..||||.|..:|:|..|.:||:|||.            :.:::.:..
plant   155 KPKSPRTHHCRTCGMCVLDMDHHCPFIGNCVGAGNHKYFIAFLI------------SAVISTSYA 207

  Fly   195 AFLVVDPLLLMFQDTTQDADFKW---------KYTIANLFKLNLFLFGV--PLFMFVFQMIMVYR 248
            |.:.|..|:.:.....:.|.:..         ..:|..:.| |:.|..:  .:|:.|..:::|| 
plant   208 AVMCVYTLIHILPPIEKGAAYASDVAHVAHGNSISILRVVK-NICLTYIANAVFISVRSLVLVY- 270

  Fly   249 NSTCYKMLDRSYDVGWRRNFDMVLGKRRFWIFFSPTISSPLPTDGTQ 295
                ..:...|..:|    ..::|.::..:|:...|..|.|.:.||:
plant   271 ----LFVASVSVAIG----LSVLLWQQLSYIYEGKTYLSHLSSQGTE 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4956NP_651428.2 zf-DHHC 123..251 CDD:279823 36/140 (26%)
AT3G18620NP_188492.2 DHHC 76..>219 CDD:418707 44/160 (28%)
DHHC 149..298 CDD:396215 39/170 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D863846at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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