DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4956 and CG13029

DIOPT Version :10

Sequence 1:NP_651428.2 Gene:CG4956 / 43114 FlyBaseID:FBgn0039370 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_648928.1 Gene:CG13029 / 39886 FlyBaseID:FBgn0036670 Length:288 Species:Drosophila melanogaster


Alignment Length:282 Identity:107/282 - (37%)
Similarity:148/282 - (52%) Gaps:41/282 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LLHPFCAIFLLCLIGLLFVYELCYVLPQITDPHGIWHKLCWFMGIYTVINILGNWWLGCMTNTS- 103
            ::||....|:|....|.|..|:.|:||:|.|..|::.|:.|.|.::.|.|:||| .|.|..|:| 
  Fly    22 IVHPSAVGFVLVGTVLFFSVEMFYMLPRIYDTDGLFFKIAWLMALFIVYNLLGN-MLACHRNSSA 85

  Fly   104 VDSLVLERQYPVAGEAHLWHYCSTCQKLVPPRSWHCSLCNICILKRDHHCTFFASCIGHKNQRYF 168
            |.||..:||.|...|.||||:|..||.|||||||||.:|..|||:|||||.|.|:|:||.|.|||
  Fly    86 VTSLPKDRQIPCPEEKHLWHFCDHCQMLVPPRSWHCKVCECCILRRDHHCIFTATCVGHTNYRYF 150

  Fly   169 LAFLFHLSFGSGQALVYNGILNWTNKAFLVVDPLLLMFQDTTQDADFKWKYTIANLFKLNLFL-- 231
            ..|..::..||..:|.       |:...|::            |...:.:|.:.:..:..|||  
  Fly   151 FWFTVYMHIGSLLSLA-------THVNLLII------------DEQIRRQYVVLHFSRFFLFLKP 196

  Fly   232 -----------FGVPLFMFVFQMIM-------VYRNSTCYKMLDRSYDVGWRRNFDMVLGKRRFW 278
                       |.:.::..:..:||       :|.|:|.|...|..|:.|...||...:|||..|
  Fly   197 MSCELIALNISFIINIYACILSLIMLGYQIPALYLNTTFYTPKDYRYNQGLLGNFMAFMGKRGLW 261

  Fly   279 IFFSPTISSPLPTDGTQWFQKQ 300
            .|.||:|.||||.|||:|..||
  Fly   262 TFISPSIRSPLPHDGTKWQTKQ 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4956NP_651428.2 DHHC 123..251 CDD:396215 47/147 (32%)
CG13029NP_648928.1 DHHC 100..236 CDD:396215 52/154 (34%)

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