DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4956 and pfa3

DIOPT Version :9

Sequence 1:NP_651428.2 Gene:CG4956 / 43114 FlyBaseID:FBgn0039370 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_595701.1 Gene:pfa3 / 2540463 PomBaseID:SPBC2F12.15c Length:329 Species:Schizosaccharomyces pombe


Alignment Length:319 Identity:76/319 - (23%)
Similarity:124/319 - (38%) Gaps:111/319 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LHRIK-----VMGLLHPFC-AIFLLCLIG--------------------LLFVYEL---CYVLPQ 67
            :|::.     |:.:|..:| .|..|.|:.                    :||:|.:   ||||..
pombe     4 IHKVSTICQCVLVILAKYCMQIIALSLMSGVQWLAWGIYKINKNRVGIIILFLYIMIVTCYVLTN 68

  Fly    68 ITDPHGIWHKLCWFMGIYTVINILGNWWLGCMTNTSVDSLVLERQYPVA--GEAHLWHYCSTCQK 130
            :|.|                         |..:.||.|. ...|||...  |::   .:|..||:
pombe    69 LTPP-------------------------GSPSETSFDP-NSTRQYMTLQNGKS---RFCEKCQE 104

  Fly   131 LVPPRSWHCSLCNICILKRDHHCTFFASCIGHKNQRYFLAFLFHLSFGSGQALVYNGILNWTNKA 195
            ....||.|||.||.|||:.||||.:|.:|:|.:|.::|....|:|:..| ..::|:..:..| |.
pombe   105 YKCDRSHHCSQCNKCILRMDHHCMWFKNCVGFRNHKFFFLECFYLNLYS-ICVLYSTFVAIT-KT 167

  Fly   196 FLV----VDPLLLMFQDTTQDADFKWKYTIANLFKLNLFLFGVPL------FMFVFQMIMVYRNS 250
            |..    :..:.|:|          |.:         ||.|.|.:      |.|....::::..|
pombe   168 FTAEGANISAIYLVF----------WGF---------LFAFAVGMSIVMTAFTFYHTSLLIHNLS 213

  Fly   251 TC---------YKMLDRSYDVGWRRNFDMVLGKRRF-WIFFSPTISSPLPT---DGTQW 296
            |.         |....:.::|||..|:..::||..| |:.       |.|.   :|.::
pombe   214 TLESMSSSWSRYTHSTQPFNVGWYENWCQIMGKSPFLWLL-------PFPNSIGEGVEY 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4956NP_651428.2 zf-DHHC 123..251 CDD:279823 38/137 (28%)
pfa3NP_595701.1 COG5273 1..300 CDD:227598 76/319 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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