DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4956 and si:ch211-223a10.1

DIOPT Version :9

Sequence 1:NP_651428.2 Gene:CG4956 / 43114 FlyBaseID:FBgn0039370 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_009305694.1 Gene:si:ch211-223a10.1 / 101884554 ZFINID:ZDB-GENE-090313-86 Length:544 Species:Danio rerio


Alignment Length:288 Identity:69/288 - (23%)
Similarity:106/288 - (36%) Gaps:82/288 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 FHRHFQLHRIK--------VMGLLHPFCAIFLLCLIGLLFVYELCYVLPQITDPHGIWH----KL 78
            :||.....|:.        ..||:|.     .:|     |:|:   ::|.....|.:.|    ..
Zfish   293 YHRLSSFQRLPNPVYLGTLTAGLIHS-----TVC-----FLYK---IIPSFWPAHTLLHLSLVHF 344

  Fly    79 CWFMGIYTVINILGNWWL-----GCMTNTSVDS-------LVLERQYPVAGEAHLWHYCSTCQKL 131
            |...|::        |.:     |.:.:...||       |:...|.|.       .:|..|:.:
Zfish   345 CVLAGLF--------WKVLKQSPGQLKDADTDSRFSSIGDLMEAGQSPD-------RFCIYCELI 394

  Fly   132 VPPRSWHCSLCNICILKRDHHCTFFASCIGHKNQRYFLAFLF-----HLSFGSGQALVYNGILNW 191
            ......||.||::||...||||.|...|:|.:|.|.|:.||.     ||.|          ||:.
Zfish   395 QVENCKHCRLCDMCIKDYDHHCLFINQCVGRENHRTFILFLMSMVMAHLIF----------ILSA 449

  Fly   192 TNKAFLVVDPLLLMFQDTTQDADFKWKYTIANLFKLNLFLFGVPLFMFVFQMIMVYRNSTCYKML 256
            ....:|.|..|.|....:....: .|...:..|..|:||..|   ::...|:..:.|.:|.|.  
Zfish   450 IFYLYLKVSGLQLSDWGSVAGRE-AWVLLLTLLNLLSLFWVG---WLLGEQLDAISRGTTTYY-- 508

  Fly   257 DRSYDV---GWRRNFDMVL-----GKRR 276
             |.||:   ..|:....|:     ||||
Zfish   509 -RRYDLKGPSKRQRLGTVVSFLLEGKRR 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4956NP_651428.2 zf-DHHC 123..251 CDD:279823 37/132 (28%)
si:ch211-223a10.1XP_009305694.1 ANK repeat 7..36 CDD:293786
Ank_2 9..102 CDD:289560
ANK 39..159 CDD:238125
ANK repeat 39..69 CDD:293786
ANK repeat 71..102 CDD:293786
Ank_2 76..162 CDD:289560
ANK repeat 138..170 CDD:293786
Ank_4 139..192 CDD:290365
zf-DHHC 384..509 CDD:279823 40/148 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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