DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17195 and GABPI

DIOPT Version :10

Sequence 1:NP_651427.2 Gene:CG17195 / 43113 FlyBaseID:FBgn0039369 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster


Alignment Length:178 Identity:48/178 - (26%)
Similarity:77/178 - (43%) Gaps:40/178 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 CESCKKLRSPRSWHCVLCNTCILRRDHHCIFTGTCIGHNNQRFFFWFTFYLTLGLVTSFATFCMF 169
            ||.|:|:...|::||.:|.||:.|||||..:...|||..|   :.|:...|.|..:.        
  Fly   268 CEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCIGERN---YVWYIVGLALSEIA-------- 321

  Fly   170 ILQNGGNFMSLSSVIFN-LITRTF-------------FQNY-TGNTFETIAFLLNISASYMPAFM 219
             |..|.| ::|:|:... ::.|..             |:.: .|.:|....:.|.|| ||: ||:
  Fly   322 -LLLGAN-LTLTSICHPFMVVRPLGYPVLLPDDCSEVFEGFDLGISFVVACYALLIS-SYI-AFI 382

  Fly   220 LAYQMQILSQNSTYYNIFDCTYDLGFRKNCQTIMGQRGLWTFISPLLK 267
            ||.|..:..:.||.:..          |......|:..:|:....:||
  Fly   383 LARQAYLWWKGSTLHEY----------KRTSNAAGRNRIWSNWRAILK 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17195NP_651427.2 DHHC 103..234 CDD:396215 43/143 (30%)
GABPINP_608741.1 DHHC 262..399 CDD:396215 43/145 (30%)

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