DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17196 and PFA4

DIOPT Version :10

Sequence 1:NP_651426.1 Gene:CG17196 / 43112 FlyBaseID:FBgn0039368 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_014640.1 Gene:PFA4 / 854159 SGDID:S000005363 Length:378 Species:Saccharomyces cerevisiae


Alignment Length:217 Identity:57/217 - (26%)
Similarity:86/217 - (39%) Gaps:40/217 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VSIGHPLSVIFLLVSTVFFFTLQVFYVAPDVHDGFMYKF-FVISAIFTTYNILGNLLACYRTSSA 83
            :.|..|..:|..:.....:|.|..|...|.     ...| |.:|.|:.:|    .|..|   ::.
Yeast    10 LGIAIPTFLISFIGYGAHYFILSNFLSVPK-----QITFEFCLSMIWLSY----YLAIC---TNP 62

  Fly    84 VKSLPQERQIPKPGTEHLW-HYCDICQKLMPPRSWHCALCKCCILKRDHHCIFAATCIGHNNH-- 145
            .:.||..:  |.|   .:| ::|..||...|.||.||..|..|:|..||||.:...|:|..|:  
Yeast    63 GRPLPNYK--PPP---DIWRNFCKKCQSYKPERSHHCKTCNQCVLMMDHHCPWTMNCVGFANYPH 122

  Fly   146 --RYFFWLTFYLAFGIFMSMATLFVDVGRSFYLLHRMKAGFGNTV-KSLSYFRYVCLILNIFALG 207
              |:.||        |.::.:.||....:..|.:.:.:...|... ||...|..:...||.|.| 
Yeast   123 FLRFLFW--------IIVTTSVLFCIQAKRIYFIWQQRHLPGYFFKKSELIFLTISSPLNSFVL- 178

  Fly   208 FPALMLRFQVQILKLNSTYYQI 229
                   ..:.||.|...:.||
Yeast   179 -------LTITILFLRCLFNQI 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17196NP_651426.1 DHHC 103..228 CDD:396215 36/129 (28%)
PFA4NP_014640.1 COG5273 1..344 CDD:227598 57/217 (26%)

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