DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17196 and AT3G56930

DIOPT Version :9

Sequence 1:NP_651426.1 Gene:CG17196 / 43112 FlyBaseID:FBgn0039368 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_191252.1 Gene:AT3G56930 / 824860 AraportID:AT3G56930 Length:477 Species:Arabidopsis thaliana


Alignment Length:171 Identity:43/171 - (25%)
Similarity:65/171 - (38%) Gaps:40/171 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LSVIFLLVSTVFFFTLQVFYVAP--DVHDGFMYKFFVISAIFTTYNILGNLLACYR--------- 79
            ||.|.:|...|.||......:|.  ..:.........:|.|.|..:|...|:...|         
plant    38 LSTILILGPAVMFFVKMYTKMADPRTKNPNLCIPILCVSWILTILDIFFLLMTSSRDPGIVPRSF 102

  Fly    80 ----TSSAVKS----------------LPQERQIPKPGTEHLWHYCDICQKLMPPRSWHCALCKC 124
                |..|..|                :|:.:.:...|......:||.|....|||:.||::|..
plant   103 RPPETDDAPDSTTPSMEWVSGRTPNIRIPRVKDVTVNGHTVKVKFCDTCLLYRPPRASHCSICNN 167

  Fly   125 CILKRDHHCIFAATCIGHNNHRYFFWLTFYLAFGIFMSMAT 165
            |:.:.||||.:...|||..|:|:||         :|:|.:|
plant   168 CVQRFDHHCPWVGQCIGVRNYRFFF---------MFISTST 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17196NP_651426.1 zf-DHHC 103..228 CDD:279823 24/63 (38%)
AT3G56930NP_191252.1 DHHC 146..271 CDD:396215 24/63 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.