DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17196 and AT3G26935

DIOPT Version :9

Sequence 1:NP_651426.1 Gene:CG17196 / 43112 FlyBaseID:FBgn0039368 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_850638.1 Gene:AT3G26935 / 822311 AraportID:AT3G26935 Length:443 Species:Arabidopsis thaliana


Alignment Length:323 Identity:63/323 - (19%)
Similarity:110/323 - (34%) Gaps:88/323 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LSVIFLLVSTVFFFTLQVFYVAPDVHDGFMYKFFVISAIFTTYNILGNLLACYRTSSAVK----- 85
            |::..:.|....|.......:..|..|.:......::.:||.|:::..||...|....:.     
plant    47 LTICLIAVPVTIFCIFVARKLIDDFSDSWGVSIVAVAVVFTIYDLILLLLTSGRDPGIIPRNAHP 111

  Fly    86 --------------------SLPQERQIPKPGTEHLWHYCDICQKLMPPRSWHCALCKCCILKRD 130
                                .||:.:::...|......|||.|....|||..||::|..|:.:.|
plant   112 PEPETLDGNMDAGAGQTPQLRLPRIKEVQLNGITFKVKYCDTCMLYRPPRCSHCSICNNCVERFD 176

  Fly   131 HHCIFAATCIGHNNHRYFFWLTFYLAFGIFMSMATLFVDVGRSFYLLHRMKAGFGNTVKSL--SY 193
            |||.:...|||..|:|:||...|..........|..:|      |:...|::....|.|::  :.
plant   177 HHCPWVGQCIGMRNYRFFFMFVFSTTLLCIYVFAFCWV------YIRKIMESEHTTTWKAMLKTP 235

  Fly   194 FRYVCLILNIFALGFPALMLRFQVQILKLNSTYYQ-------ISSRHHDLGFRNNC--------- 242
            ...|.:|....::.|...:..|.:.::..|.|.|:       ..|..|:.|..||.         
plant   236 ASIVLIIYTFISMWFVGGLTVFHLYLISTNQTTYENFRYRYDRRSNPHNKGVVNNFKETFFSTIP 300

  Fly   243 -----------------------------------QLIMGQRGLWTFISPSLRSPLPH-DGTH 269
                                               ::.||::.:|..:.|::..   | ||.|
plant   301 PSKNDFRAMVQREPPLPPRSVAGGFMSPNMGKANDEIEMGRKAVWADMGPAMSD---HGDGKH 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17196NP_651426.1 zf-DHHC 103..228 CDD:279823 35/126 (28%)
AT3G26935NP_850638.1 DHHC 149..274 CDD:396215 36/130 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.