DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17196 and GABPI

DIOPT Version :10

Sequence 1:NP_651426.1 Gene:CG17196 / 43112 FlyBaseID:FBgn0039368 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster


Alignment Length:223 Identity:47/223 - (21%)
Similarity:88/223 - (39%) Gaps:67/223 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SVIFLLVSTVFFFTLQVFYVAPDVHDGFMYKFFVISAIFTTYNILG----NLLACYRTSSAVKSL 87
            ||.::::  :|.|.:.:..:||:  :.:...||..:|::..|:...    ||::....::....|
  Fly   157 SVFYMII--IFEFQVPLLELAPE--ENYALMFFSCAALYCLYSAKALSPLNLVSAQYGTTPKDEL 217

  Fly    88 P-------QERQIPKPGT----------------------EHLWH----YCDICQKLMPPRSWHC 119
            |       .|.|.....|                      ..|.|    .|:||:|:.|.|::||
  Fly   218 PGIAEASSGEEQAEAQTTLQMESVLSLDDDEVGDMDTAERSGLMHGQPNICEICRKVTPRRAYHC 282

  Fly   120 ALCKCCILKRDHHCIFAATCIGHNNHRYFFWLTFYLAFGIFMSMATLFVDVGRSFYLLHRMKAGF 184
            .:|..|:.:||||..:...|||..|:.::.       .|:.:|...|.:              |.
  Fly   283 PVCGTCVKRRDHHSYWLNCCIGERNYVWYI-------VGLALSEIALLL--------------GA 326

  Fly   185 GNTVKSLSYFRYVCLILNIFALGFPALM 212
            ..|:.|:.:     ..:.:..||:|.|:
  Fly   327 NLTLTSICH-----PFMVVRPLGYPVLL 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17196NP_651426.1 DHHC 103..228 CDD:396215 29/114 (25%)
GABPINP_608741.1 DHHC 262..399 CDD:396215 29/114 (25%)

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