DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17196 and dhhc-3

DIOPT Version :9

Sequence 1:NP_651426.1 Gene:CG17196 / 43112 FlyBaseID:FBgn0039368 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_491702.1 Gene:dhhc-3 / 172257 WormBaseID:WBGene00018009 Length:260 Species:Caenorhabditis elegans


Alignment Length:252 Identity:58/252 - (23%)
Similarity:104/252 - (41%) Gaps:53/252 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VIFLLVSTVFFFTLQVFYVAPDVHDGFMYKFFVI--SAIFTTYNILGNLLACYRTSSAVKSLPQE 90
            |.:||   ||:..:.||.|.  ::....|.|..|  ..:|.::::|..:       |.:|::..:
 Worm     5 VTWLL---VFYGQVCVFLVM--LYSWETYPFHTIFNFIVFESFSVLAVI-------SHLKTMTTD 57

  Fly    91 RQIPKPGT-------------------EHLWHYCDICQKLMPPRSWHCALCKCCILKRDHHCIFA 136
                 ||.                   :...:.|..|..:.|.|:.||::|:.||.:.||||.:.
 Worm    58 -----PGAVAKGDCTDETIERMQLINGQQTIYKCQKCASIKPDRAHHCSVCERCIRRMDHHCPWV 117

  Fly   137 ATCIGHNNHRYFFWLTFYLAFGIFMSMATLFVDVGRSFYLLHRMKAGFGNTVKSLSYFRYVCLIL 201
            ..|:|..|.::|...|.|:|   .:||..|:..|.:....:........:.....:....:.|:.
 Worm   118 NNCVGEGNQKFFVLFTMYIA---LLSMHALYWGVWQFVLCVGAEWQQCSSLTPPATTLLLIFLLF 179

  Fly   202 N--IFALGFPALMLRFQV-QILKLNSTYYQISSRHHDLG----FRNNC----QLIMG 247
            .  :||: |.::|...|: .|....:|...:.||:.:|.    .|||.    ||:.|
 Worm   180 ESILFAI-FTSVMFGTQISSICNDETTIESMRSRNANLDEDERSRNNAWKNLQLVFG 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17196NP_651426.1 zf-DHHC 103..228 CDD:279823 32/127 (25%)
dhhc-3NP_491702.1 zf-DHHC 86..211 CDD:279823 32/128 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.