DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17197 and pfa3

DIOPT Version :9

Sequence 1:NP_651425.2 Gene:CG17197 / 43111 FlyBaseID:FBgn0039367 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_595701.1 Gene:pfa3 / 2540463 PomBaseID:SPBC2F12.15c Length:329 Species:Schizosaccharomyces pombe


Alignment Length:237 Identity:54/237 - (22%)
Similarity:101/237 - (42%) Gaps:45/237 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 VAIFITYNIFGNMLACHI-TSTSVESLPKDRQIPEPEEEHQW--------HYCDVCEKLMPPRSW 119
            |.|.|.: ::..::.|:: |:.:....|.:... :|....|:        .:|:.|::....||.
pombe    49 VGIIILF-LYIMIVTCYVLTNLTPPGSPSETSF-DPNSTRQYMTLQNGKSRFCEKCQEYKCDRSH 111

  Fly   120 HCILCKCCILKRDRHCIFTASCVGHNNQRYFFWFTLFMALGTGVALATHIIATLKYFSYSDLIFL 184
            ||..|..|||:.|.||::..:|||..|.::||....::.|.:...|.:..:|..|.|:....   
pombe   112 HCSQCNKCILRMDHHCMWFKNCVGFRNHKFFFLECFYLNLYSICVLYSTFVAITKTFTAEGA--- 173

  Fly   185 NIPRDNLPPFWLVITLILNTYVFAAPVSSVLMQLS------VLKNNGTLHKFYS---------DT 234
                 |:...:||....|  :.||..:|.|:...:      ::.|..||....|         ..
pombe   174 -----NISAIYLVFWGFL--FAFAVGMSIVMTAFTFYHTSLLIHNLSTLESMSSSWSRYTHSTQP 231

  Fly   235 YDLGLWENFKLILGGKGFWTFLSPTVKSPLPH---DGAQWKI 273
            :::|.:||:..|:|...|...|      |.|:   :|.::.:
pombe   232 FNVGWYENWCQIMGKSPFLWLL------PFPNSIGEGVEYPL 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17197NP_651425.2 PHA02688 <9..70 CDD:222919 3/5 (60%)
zf-DHHC 100..>198 CDD:279823 27/105 (26%)
pfa3NP_595701.1 COG5273 1..300 CDD:227598 54/237 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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