DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17198 and CG5880

DIOPT Version :9

Sequence 1:NP_001287532.1 Gene:CG17198 / 43110 FlyBaseID:FBgn0039366 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster


Alignment Length:327 Identity:78/327 - (23%)
Similarity:125/327 - (38%) Gaps:95/327 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 NVCIILFFYFFE-------AFYV------------MPQFLGL-FGQAVHFLVT-------TWIVY 81
            :||:...|:|.:       .|:|            :..::|| |..|...|||       .|::.
  Fly    45 DVCLTPIFWFVDNYTHCLGPFFVVGVAALTTSVVSIAYWIGLPFWWAKSQLVTYFLLIVGNWLLL 109

  Fly    82 NILENLRLCVTTLNTVDSLPPQMQQPMKGEEHLWHFCKICQRNVPPRSWHCNICDACILKRDHHC 146
            |::.:..:.|.   |....||:....::...    .|..|....|||:.||:||:.||||.||||
  Fly   110 NVVFHYVMAVI---TPAGHPPEGVSLVEAVS----MCGKCIAPKPPRTHHCSICNRCILKMDHHC 167

  Fly   147 NFVGNCVGHNNQRYFIWFSFYAAIGSAVALFDNFMLAHK-----HGVGFFDL-------VKAN-- 197
            .::.||||:.|.|||..:..|..:|....:.....:.||     ||..:.::       ||.|  
  Fly   168 PWLNNCVGYGNHRYFFLYMTYTTLGCLFLILFGLEIGHKYLWLDHGENWTEIEPLEGQPVKFNLS 232

  Fly   198 --------------YIIFNAYMN------------PGRKELVIFYRIVSVLGVNIFAVLFPAALF 236
                          :::..|..|            |||:..:.|   ::...|.:...|...:::
  Fly   233 GHIIPVTHPNEYDEFVLPPAVHNLPTPIVDTDAASPGRRRALWF---MAFTNVAVVLALGSLSIW 294

  Fly   237 CTQVVTVIKNSV----------MHDYSDR----TYDLGLGNNLTLILG---SRRLW-TCLSPNIK 283
            ..:::|..:.||          .|....|    .|:.|...|..|.||   .|..| |.|.|:..
  Fly   295 HAKLITRGETSVEAHINEAERKRHLQQQRIYINPYNFGTKKNWKLFLGLVRGRSFWRTVLLPSWH 359

  Fly   284 SP 285
            .|
  Fly   360 KP 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17198NP_001287532.1 zf-DHHC 43..>176 CDD:303066 46/158 (29%)
zf-DHHC 111..252 CDD:279823 46/190 (24%)
CG5880NP_651539.3 zf-DHHC 139..>201 CDD:279823 27/61 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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