DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LpR2 and si:dkey-88l16.3

DIOPT Version :10

Sequence 1:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster
Sequence 2:XP_073770595.1 Gene:si:dkey-88l16.3 / 796880 ZFINID:ZDB-GENE-030131-6015 Length:3896 Species:Danio rerio


Alignment Length:927 Identity:289/927 - (31%)
Similarity:405/927 - (43%) Gaps:205/927 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 SINSVLNGNPLKFLNVSGKIGTPLDISLGLSNYCDEKQFQCSTGECIPIRFVCDGSSDCPDHSDE 224
            ||....|.:|||.|.....           |.:|.|      |.:|:|...:|||..|||..:||
Zfish  2575 SIPDASNADPLKTLGCRSP-----------SMFCKE------TSKCMPESQLCDGKVDCPSGADE 2622

  Fly   225 RLEECKFTESTCSQ-EQFRC-GNGKCIPRRWVCDRENDCADGSDE-----STSQCRSHT------ 276
                 :|...:||. :.|.| ...||:.:..|||..:.|||||||     ...||...|      
Zfish  2623 -----QFCIYSCSDPDHFLCKDKRKCVHKAVVCDGYSHCADGSDEYQCPTCALQCDQKTVCLTKQ 2682

  Fly   277 --------------------------------CSPEEFACKSGEGECIPLSWMCDQNKDCRDGSD 309
                                            |......|..|: ||:.|..:||..|||:||||
Zfish  2683 QRCDGKPDCRDGSDEKDCYTGGVIASTSLPLRCPLGSKPCMDGK-ECVLLDHLCDGEKDCKDGSD 2746

  Fly   310 EAQCNRTCRSDEFTCGNGR-CIQNRFKCDDDDDCGDGSDEKNCGE-----KAKCGSNFFACKSGP 368
            |..|.|.|:..:|.|.:|| ||..:|.||....|.|.|||.||.:     :.:|.:      ...
Zfish  2747 ERTCERKCKKGQFQCSHGRKCIDMKFVCDGTPQCQDRSDEANCMKLSDECRHQCDN------KTR 2805

  Fly   369 CIPNQWVCDGDSDCRNGEDEMQNCTVSLLNFCQAGEFQCSD------------------------ 409
            |:|..::|||:.||.:|.|| .||.|..   |....||||:                        
Zfish  2806 CVPETFLCDGEKDCVDGTDE-ANCVVEP---CSGDRFQCSNGQCVALSLRCDGYADCRDHTDEKG 2866

  Fly   410 ---------------RITCLHKSWVCDGEADCPDGEDESQSNCLKVSCRPDQFQCNDQS-CIAGH 458
                           ...||.|.|:|||:.||.||.||.......:.|...|:.|..:: |||..
Zfish  2867 CPQPPHCPLDHRCPHTHECLLKEWLCDGDKDCSDGSDERNCKATPLKCGEFQWSCASRTQCIAKT 2931

  Fly   459 LTCNGKRDCADGSDEIMCDISATPRTCNATTEFDCGGGLCIPNAKVCNRRKDCPNGEDEPAGKCG 523
            ..|:|.:||.|.|||..|..:..|     |..|.||.|.|:....|||:..||.:|.||..| |.
Zfish  2932 WRCDGMKDCQDESDESGCGQTKCP-----THLFQCGSGECMDPDLVCNKASDCADGSDEGVG-CL 2990

  Fly   524 INECSSKNG-GCMHQCVNLEVGYRCECHDGYKLGADQHTCVDIDECE--TPGICSQVCVNEIGAF 585
            .|.|||... .|.|.|:|...|.||.|..|:||.:|..:|||||||:  .|..||..|.|.:|::
Zfish  2991 KNNCSSPGSPSCQHYCINTPHGARCGCKTGFKLHSDGLSCVDIDECKEIQPAACSHKCFNRLGSY 3055

  Fly   586 KCECEAGYMRLLKNHTRCKASEGHASLLLARRHDIRKIALDRPEMTSIVNST----KAATALDFV 646
            .|:|...::.....|: ||.:: ..|||::.:.::..:.|   ...||...|    |...:||:.
Zfish  3056 ICQCHPEFLLEPDGHS-CKTAD-EPSLLVSEQDELLNMGL---RSFSIQTLTAPGRKPIFSLDYD 3115

  Fly   647 FRTGMIFWSDVATQSI-YKAPIDEGNDRTVVLTKSSVTSDGLAVDWIYNHVYFTD---THKCTIE 707
            .|...::|:.:..:|| |....::.|..|:|   ..|.||.:|:||:..::|:.|   .....:.
Zfish  3116 LRERRVYWASLEDESIKYAFHGEKDNTGTIV---KGVKSDCIAIDWMGRNLYWVDGVAGQILAVR 3177

  Fly   708 LTN--FEGSMGKVLVKDSLDIPRSIALDPIEGWMYWSDWGASPRIERAGMDGTHRTAIITYDVKW 770
            |||  .......|::.:.|..|.|:.|.|.:|.|.||..|...:|.|:.|||:.|.|:|...:.|
Zfish  3178 LTNSVVHPQNYVVVLDEDLKQPNSLVLLPQKGIMLWSQVGGQAQIGRSSMDGSDRRAVIRRGLNW 3242

  Fly   771 PNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRHQVLYSGEYLRHPFSITTFEDYVYWTDWDKQA 835
            |..:|:|::..||||.|.||..|.|:..||.....:..|  ::..|.|:..|.|.:||:|..:::
Zfish  3243 PVSVTVDILTDRLYWTDKKLGCIGSATLDGENIRFLQLS--HMPSPLSMAVFNDMIYWSDTQRRS 3305

  Fly   836 VFKANKFNGMD-----VEPVTATHMLEHPMVVHVYHPYRQPDGVNHCQSVNGHCSHLCLPAPRIN 895
            |..|||..|.:     ..|       ..|..:.|.||.:||:..|.|||:  ||||:||.||.: 
Zfish  3306 VQGANKLTGKNRKVFLKRP-------GQPFALKVVHPLQQPNVPNPCQSL--HCSHVCLLAPGL- 3360

  Fly   896 ERSPRISCACPTGLKLMPDGLMC---VED-------LGIPTVRPTA-------------PMHRTI 937
                :..|.|||...|..|||.|   ::|       |.:.|:....             |.||: 
Zfish  3361 ----KAVCRCPTRAPLAADGLTCGSTLDDSSSYLMLLSLTTITQIFTKSMQSEVGLKQWPNHRS- 3420

  Fly   938 EQSSNSTTKLPQDGYSE 954
                     ||..|.||
Zfish  3421 ---------LPLLGVSE 3428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR2NP_001097928.1 LDLa 193..224 CDD:197566 11/30 (37%)
LDLa 235..267 CDD:197566 14/33 (42%)
LDLa 277..313 CDD:238060 16/35 (46%)
LDLa 356..388 CDD:197566 9/31 (29%)
LDLa 400..432 CDD:197566 16/70 (23%)
LDLa 442..476 CDD:238060 14/34 (41%)
LDLa 484..517 CDD:197566 12/32 (38%)
FXa_inhibition 527..562 CDD:464251 15/35 (43%)
EGF_CA 564..594 CDD:214542 13/31 (42%)
LY 675..715 CDD:214531 12/44 (27%)
LY 717..760 CDD:214531 16/42 (38%)
LY 763..803 CDD:214531 16/39 (41%)
Ldl_recept_b 782..828 CDD:459654 16/45 (36%)
Ldl_recept_b 824..866 CDD:459654 12/46 (26%)
FXa_inhibition 877..918 CDD:464251 19/40 (48%)
si:dkey-88l16.3XP_073770595.1 None

Return to query results.
Submit another query.