DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR2 and si:dkey-258f14.3

DIOPT Version :9

Sequence 1:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster
Sequence 2:XP_021334056.1 Gene:si:dkey-258f14.3 / 571152 ZFINID:ZDB-GENE-050809-43 Length:526 Species:Danio rerio


Alignment Length:604 Identity:177/604 - (29%)
Similarity:266/604 - (44%) Gaps:125/604 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 CIPLSWMCDQNKDCRDGSDEAQCNRTCRSDEFTCGNGRCIQNRFKCDDDDDCGDGSDEKNCGEKA 355
            |:||:          :|..:      |...:|.|.|.||:....:||..:||||||||.:|    
Zfish    28 CLPLT----------EGFPK------CTVLQFVCANSRCVSLSSRCDAVNDCGDGSDEISC---- 72

  Fly   356 KCGSNFFACKSGPCIPNQWVCDGDSDCRNGEDEMQNCTVSLLNFCQAGEFQCSDRITCLHKSWVC 420
                              |                |||        .|.|.|....:|:..|.||
Zfish    73 ------------------W----------------NCT--------NGSFHCVASESCVSSSSVC 95

  Fly   421 DGEADCPDGEDESQSNCLKVSCRPDQFQCNDQSCIAGHLTCNGKRDCADGSDEIMCDISATPRTC 485
            ||..||.||.||....|...|        ..|.|                               
Zfish    96 DGRPDCADGADEQLDTCTSFS--------QAQPC------------------------------- 121

  Fly   486 NATTEFDCGGGLCIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECH 550
             |.:||.|..|.|:||:..|:...||.:|.||.  .|..|||:..||||.|.|::|..|:||:|.
Zfish   122 -ARSEFTCTNGQCVPNSWRCDHSSDCKDGSDEE--DCDHNECAVNNGGCSHTCIDLPFGFRCDCP 183

  Fly   551 DGYKLGADQHTCVDIDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKASEGHASLLLA 615
            .|.:|..|.| |..:|:|....:|.|:||:..|:..|:|:.|| :|.....:|:|:.|.|.:.::
Zfish   184 KGMRLVQDTH-CEVVDQCLDADVCDQICVHSNGSVVCDCQDGY-QLTAGTGQCRATGGLAHVAVS 246

  Fly   616 RRHDIRKIALDRPEMTSIVNSTKAATALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRTVVLTKS 680
            .:..|:.:.|...|..:|.:...:...:..:.....::||......||:..:|.|:.|..|..|:
Zfish   247 TQEGIKMMDLSGSEERNITDKRLSPGPVSALNAHNTLYWSSPENDIIYRMSLDSGDHRPAVWLKA 311

  Fly   681 SVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIEGWMYWSDWG 745
            |....|||||||:..:|:..|....:.:.:.:.:..::|: ..|..|.::|:.|:.|:::|::.|
Zfish   312 SKGIVGLAVDWIHESLYWISTSTRALHMASLKNTKQRLLI-SGLSKPTAVAVQPLLGYVFWAEGG 375

  Fly   746 ASPRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRHQVLYSG 810
            .|.||||.|:||..|.|::...|:.|..|:||:.:..|||.|..|.:||...:||..|..|:.|.
Zfish   376 ESARIERVGLDGESRFALVVSFVRNPVAISLDIPRGLLYWADSGLRSISRVLFDGQYRKTVVESN 440

  Fly   811 EYLRHPFSITTFEDYVYWTDWDKQAVFKANKFNGMDVEPVTATHMLE--------HPMVVHVYHP 867
            .||..||.:..||..|||:|....::..|:|.||.         ||.        .|..:.:.||
Zfish   441 GYLDQPFGLAIFESRVYWSDQLTNSICSADKHNGT---------MLRVPQRLGSASPAGLVILHP 496

  Fly   868 YRQPDGVNHC-QSVNGHCS 885
            ..||.....| .|:.|..|
Zfish   497 LLQPAAALSCLYSLTGAVS 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR2NP_001097928.1 LDLa 193..224 CDD:197566
LDLa 235..267 CDD:197566
LDLa 277..313 CDD:238060 4/21 (19%)
LDLa 356..388 CDD:197566 1/31 (3%)
LDLa 400..432 CDD:197566 13/31 (42%)
LDLa 442..476 CDD:238060 2/33 (6%)
LDLa 484..517 CDD:197566 12/32 (38%)
FXa_inhibition 527..562 CDD:291342 16/34 (47%)
EGF_CA 564..594 CDD:214542 10/29 (34%)
LY 675..715 CDD:214531 12/39 (31%)
LY 717..760 CDD:214531 16/42 (38%)
LY 763..803 CDD:214531 14/39 (36%)
FXa_inhibition 877..918 CDD:291342 4/10 (40%)
si:dkey-258f14.3XP_021334056.1 LDLa 38..72 CDD:238060 16/33 (48%)
PRKCSH-like <45..>112 CDD:193472 34/112 (30%)
LDLa 121..155 CDD:238060 15/67 (22%)
FXa_inhibition 160..193 CDD:317114 15/32 (47%)
Ldl_recept_b 367..407 CDD:278487 16/39 (41%)
LY 393..433 CDD:214531 14/39 (36%)
LY 434..476 CDD:214531 16/50 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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