DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR2 and lrp13

DIOPT Version :9

Sequence 1:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster
Sequence 2:XP_021327248.1 Gene:lrp13 / 562438 ZFINID:ZDB-GENE-130729-1 Length:1354 Species:Danio rerio


Alignment Length:818 Identity:269/818 - (32%)
Similarity:392/818 - (47%) Gaps:136/818 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 CDEKQFQCSTGE-CIPIRFVCDGSSDCPDHSDERLEECKFTESTCSQEQFRC-GNGKCIPRRWVC 255
            |....|||:.|: ||.:|.||||...|.|.|||.  .|...:..|:.   || ||.:|:|..:||
Zfish    75 CSVGHFQCAHGKMCIWLRQVCDGVPQCQDRSDEL--NCFKPDDGCAH---RCDGNTRCVPESFVC 134

  Fly   256 DRENDCADGSDESTSQCRS---------------------H-------------TCSPEEFACKS 286
            |.:.||.|||||  :.|.:                     |             .||.....|:.
Zfish   135 DGDVDCVDGSDE--ANCENPDDDDDDDEDLLDEKEEMTGEHEVSQNVPATKGPLRCSIASKLCRD 197

  Fly   287 GEGECIPLSWMCDQNKDCRDGSDEAQCNRTCRSDEFTCGNG------------------------ 327
            |. :|:.|:.:||...||:|||||..|...|.|.:|.|.:|                        
Zfish   198 GT-DCVMLNHVCDGELDCKDGSDEEDCPVQCESGQFQCAHGKKCIDRRQLCDGVPQCQDRSDELN 261

  Fly   328 ----------------RCIQNRFKCDDDDDCGDGSDEKNCGEKAKCGSNFFACKSGPCIPNQWVC 376
                            ||:...|.||.|.||.|||||.||||:: |.|..:.|.||.|:.....|
Zfish   262 CFKPDDDCAHRCDENTRCVPESFVCDGDPDCVDGSDEANCGEES-CSSAEWQCSSGQCVSLSMRC 325

  Fly   377 DGDSDCRNGEDEMQNCTVSLLNFCQAGEFQCSDRITCLHKSWVCDGEADCPDGEDESQSNCLK-- 439
            ||.||||:..|| ::|...  ..|.... :|.....||...|:||||.||.||.||  .||.:  
Zfish   326 DGHSDCRDHSDE-EDCAEP--PPCSTNR-RCPKSHECLLDEWMCDGETDCKDGTDE--KNCKESP 384

  Fly   440 VSCRPDQFQCNDQS-CIAGHLTCNGKRDCADGSDEIMC-DISATPRTCNATTEFDCGGGLCIPNA 502
            |.|...||.|:.:: ||.....|:|..||.|||||..| .:|..|..      |.||...|:..:
Zfish   385 VQCGEYQFSCSSKTQCIPQSWRCDGSEDCRDGSDESACASVSCPPHL------FQCGSSECVEFS 443

  Fly   503 KVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGADQHTCVDIDE 567
            ::||...:|.:|.|| .|.|...:||.:. .|...|.:...|.||.|..|||...|...|.|:||
Zfish   444 QLCNGVTNCLDGSDE-GGSCQTEKCSEQL-KCAQDCHSTPAGARCGCRMGYKPVDDGLRCADVDE 506

  Fly   568 C-ETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKASEGHASLLLARRHDIRKIALDRPEMT 631
            | |.|.|||..|.|.:|:|:|.|..||:.....|: ||.: |...||.:.:.::..:.|....:.
Zfish   507 CVERPNICSHRCNNTLGSFQCSCSHGYVLEPDGHS-CKIT-GEPYLLASVQSEVFLLGLRSSSLD 569

  Fly   632 SIVNSTKA-ATALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRTVVLTKSSVTSDGLAVDWIYNH 695
            .::::.|. ..:||:.::...::|.::.|.:|....:|:.|..|.:   ..:::|.|||||:..:
Zfish   570 ILLSAEKRFVLSLDYDWQKQRVYWINLNTDTIKWLSLDQKNKGTFL---KGISADSLAVDWVARN 631

  Fly   696 VYFTDTHKCTIELTNFEGSMGK-----VLVKDSLDIPRSIALDPIEGWMYWSDWGASPRIERAGM 755
            :|:||:....|.....:..:|:     :::.:.|...|||||.|.:|.|:||:.|...:||||||
Zfish   632 LYWTDSENSQINAVRLDSEIGRSTDRVMILGEDLGQLRSIALMPQKGIMFWSETGDEAQIERAGM 696

  Fly   756 DGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGS--QRHQVLYSGEYLRHPFS 818
            ||:.|..:::..::||..:|:|.:.:|:||.|.||..|.|:|.||.  :..|::.:..    |||
Zfish   697 DGSDRRVLVSKSLRWPVSLTVDSLHQRIYWTDEKLKCIGSANIDGGDVKLLQLMETPS----PFS 757

  Fly   819 ITTFEDYVYWTDWDKQAVFKANKFNGMDVEPVTATHMLE---HPMVVHVYHPYRQPDGVNHCQSV 880
            ::.|.|.|||:|..:..:.:|:|..|...:.     :|:   .|..:.|.|...|.|..|.|:|.
Zfish   758 VSVFNDQVYWSDTKRGTIQRAHKTTGKQRQV-----LLKRPGQPFGLKVIHGLLQEDVSNPCESQ 817

  Fly   881 NGHCSHLCLPAPRINERSPRISCACPTGLKLMPDGLMC 918
            .  |||||:.||.:     :..|.|.|...|..|||.|
Zfish   818 G--CSHLCVLAPGL-----KAVCKCSTQFLLDEDGLTC 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR2NP_001097928.1 LDLa 193..224 CDD:197566 15/31 (48%)
LDLa 235..267 CDD:197566 15/32 (47%)
LDLa 277..313 CDD:238060 15/35 (43%)
LDLa 356..388 CDD:197566 13/31 (42%)
LDLa 400..432 CDD:197566 13/31 (42%)
LDLa 442..476 CDD:238060 15/34 (44%)
LDLa 484..517 CDD:197566 8/32 (25%)
FXa_inhibition 527..562 CDD:291342 12/34 (35%)
EGF_CA 564..594 CDD:214542 16/30 (53%)
LY 675..715 CDD:214531 10/39 (26%)
LY 717..760 CDD:214531 20/47 (43%)
LY 763..803 CDD:214531 15/41 (37%)
FXa_inhibition 877..918 CDD:291342 16/40 (40%)
lrp13XP_021327248.1 LDLa 36..71 CDD:238060
LDLa 75..110 CDD:238060 17/36 (47%)
LDLa 119..149 CDD:238060 16/34 (47%)
LDLa 195..223 CDD:238060 13/28 (46%)
LDLa 227..262 CDD:238060 5/34 (15%)
LDLa 271..301 CDD:238060 13/29 (45%)
LDLa 306..340 CDD:238060 15/34 (44%)
LDLa 351..380 CDD:238060 14/30 (47%)
LDLa 387..422 CDD:238060 15/34 (44%)
LDLa 427..458 CDD:197566 9/36 (25%)
EGF_CA 503..542 CDD:311536 18/39 (46%)
PHA02142 <569..>666 CDD:333147 20/99 (20%)
LY <622..648 CDD:214531 9/25 (36%)
Ldl_recept_b 680..718 CDD:278487 16/37 (43%)
LY 702..744 CDD:214531 15/41 (37%)
LY 744..786 CDD:214531 13/45 (29%)
FXa_inhibition 818..848 CDD:317114 14/36 (39%)
LY 976..1021 CDD:214531
FXa_inhibition 1130..1162 CDD:317114
LDLa 1170..1202 CDD:197566
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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