DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR2 and CD320

DIOPT Version :10

Sequence 1:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster
Sequence 2:NP_057663.1 Gene:CD320 / 51293 HGNCID:16692 Length:282 Species:Homo sapiens


Alignment Length:228 Identity:63/228 - (27%)
Similarity:88/228 - (38%) Gaps:92/228 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 SHTCSPEEFACKSGEGECIPLSWMCDQNKDCRDGSDEAQCNRTCRSDEFTCGNGRCIQNRFKCDD 338
            |.:|.|.:|.|:: .|.|:||:|.||::.||.|||||.:|.                        
Human    51 SGSCPPTKFQCRT-SGLCVPLTWRCDRDLDCSDGSDEEECR------------------------ 90

  Fly   339 DDDCGDGSDEKNCGEKAKCGSNFFACKSGPCIPNQWVCDGDSDCRNGED-EMQNCTVSLLNFCQA 402
                     .:.|.:|.:       |...|.:|  ..|.|.|||..|.| :::||:...   |.|
Human    91 ---------IEPCTQKGQ-------CPPPPGLP--CPCTGVSDCSGGTDKKLRNCSRLA---CLA 134

  Fly   403 GEFQCSDRITCLHKSWVCDGEADCPDGEDESQSNCLKVSCRPDQFQCNDQSCIAGHLTCNGKRDC 467
            ||.:|:....|:..:|.|||..||||..||                          |.|      
Human   135 GELRCTLSDDCIPLTWRCDGHPDCPDSSDE--------------------------LGC------ 167

  Fly   468 ADGSDEIMCDISAT----PRTC-------NATT 489
              |::||:.:..||    |.|.       ||||
Human   168 --GTNEILPEGDATTMGPPVTLESVTSLRNATT 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR2NP_001097928.1 LDLa 193..224 CDD:197566
LDLa 235..267 CDD:197566
LDLa 277..313 CDD:238060 18/35 (51%)
LDLa 356..388 CDD:197566 10/32 (31%)
LDLa 400..432 CDD:197566 14/31 (45%)
LDLa 442..476 CDD:238060 5/33 (15%)
LDLa 484..517 CDD:197566 5/13 (38%)
FXa_inhibition 527..562 CDD:464251
EGF_CA 564..594 CDD:214542
LY 675..715 CDD:214531
LY 717..760 CDD:214531
LY 763..803 CDD:214531
Ldl_recept_b 782..828 CDD:459654
Ldl_recept_b 824..866 CDD:459654
FXa_inhibition 877..918 CDD:464251
CD320NP_057663.1 LDLa 54..89 CDD:238060 18/35 (51%)
LDLa 132..167 CDD:238060 17/60 (28%)
Blue background indicates that the domain is not in the aligned region.

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