DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR2 and ImpE1

DIOPT Version :9

Sequence 1:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster
Sequence 2:NP_001261577.1 Gene:ImpE1 / 45879 FlyBaseID:FBgn0001253 Length:1616 Species:Drosophila melanogaster


Alignment Length:414 Identity:105/414 - (25%)
Similarity:157/414 - (37%) Gaps:112/414 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 AAHV---TAATPTASEIMHNLSGSALLERLKASTLGPTLDQLKHLAP-AAANSISPGTGSGMGIG 153
            |||.   ..|||..::|:...:.:.|....:.:.:.|....:..|.| ..|:..:|...|...|.
  Fly  1271 AAHAIPHEEATPNPADIVEITTQTMLGLASRVTLMEPAAPVVTTLMPLMTADEPTPEPVSPAAIP 1335

  Fly   154 MGHFGSSINSVLNGNPLKFLNVSGKIGTPLDISLGLSNYCDEKQFQCSTGECIPIRFVCDGSSDC 218
                .:|:.::..|..|:           ..:.|||              |.:.:...|  ||| 
  Fly  1336 ----SASLAAIKPGTELR-----------KRVDLGL--------------EAVSLGLAC--SSD- 1368

  Fly   219 PDHSDERLEECKFTE--STCSQEQFRCGNGKCIPRRWVCDRENDCADGSDESTSQCRSHT--CSP 279
                    .:|:..:  :.|:             ||.||    |||.|  |..|||.:..  |||
  Fly  1369 --------RQCQLADPHTVCN-------------RRGVC----DCAAG--EEGSQCSAERTGCSP 1406

  Fly   280 EEFACKSGEGECIPLSWMCDQNKDCRDGSDE-----AQCNRTCRSDEFTC-GNGRCIQNRFKCDD 338
            ..|.|:| .|.||...::||...||.|.|||     |:.|:||.::.|.| .:||||.....||.
  Fly  1407 GTFQCRS-SGVCISWFFVCDGRADCNDASDEECTHNARLNQTCPTESFRCQRSGRCISRAALCDG 1470

  Fly   339 DDDCGDGSDEKNCGEKAK----CGSNFFACKSGPCIPNQWVCDGDSDCRNGEDEMQNCTVS---- 395
            ...|..|.||..|....|    |..:.|.|.||.|:|....|:....|::|.||..:...|    
  Fly  1471 RRQCPHGEDELGCDGSVKGGNACPEHTFRCGSGECLPEYEYCNAIVSCKDGSDEPPHLCGSRALP 1535

  Fly   396 --LLNFCQAGEFQCSDRITCLHKSWVCDGEADCPDGEDESQSNCLKVSCRPDQFQCNDQSCIAGH 458
              .:...:||......|         .:.:|.||                   .:|::..|.:..
  Fly  1536 NLFMRLIEAGGLLGGGR---------READAYCP-------------------HRCSNGLCRSTA 1572

  Fly   459 LTCNGKRDCADGSDEIMCDISATP 482
            :.|:|:..|.||:||..|.:...|
  Fly  1573 IVCSGRDGCGDGTDEQTCSVCRCP 1596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR2NP_001097928.1 LDLa 193..224 CDD:197566 5/30 (17%)
LDLa 235..267 CDD:197566 9/31 (29%)
LDLa 277..313 CDD:238060 18/40 (45%)
LDLa 356..388 CDD:197566 11/35 (31%)
LDLa 400..432 CDD:197566 6/31 (19%)
LDLa 442..476 CDD:238060 9/33 (27%)
LDLa 484..517 CDD:197566
FXa_inhibition 527..562 CDD:291342
EGF_CA 564..594 CDD:214542
LY 675..715 CDD:214531
LY 717..760 CDD:214531
LY 763..803 CDD:214531
FXa_inhibition 877..918 CDD:291342
ImpE1NP_001261577.1 EB 75..131 CDD:279949
LDLa 1404..1437 CDD:238060 16/33 (48%)
LDLa 1448..1483 CDD:238060 13/34 (38%)
LDLa 1493..1524 CDD:238060 10/30 (33%)
LDLa 1561..1590 CDD:238060 9/28 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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