DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR2 and Lrp3

DIOPT Version :9

Sequence 1:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster
Sequence 2:NP_001019878.1 Gene:Lrp3 / 435965 MGIID:3584516 Length:790 Species:Mus musculus


Alignment Length:452 Identity:115/452 - (25%)
Similarity:150/452 - (33%) Gaps:169/452 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 ISLGLSNYCDEKQFQCS-----TGECIPIR---FVCDGSSDCPD------------HSDE----- 224
            |::...|:..|:..|||     .|...|.|   |...||:..|.            |||.     
Mouse   105 ITISFRNFDVEESHQCSLDWLLLGPAAPPRQEAFRLCGSAIPPAFISARDHVWIFFHSDASSSGQ 169

  Fly   225 ----RLE--ECKFTESTCSQEQFRCGNGKCIPRRWVCDRENDCADGSDESTSQCRSHTCSPEEFA 283
                ||.  ..|..:::|..::|||.||||:|..|.|:..::|.|||||  ..|.:....|....
Mouse   170 AQGFRLSYIRGKLGQTSCQTDEFRCDNGKCLPGPWQCNMVDECGDGSDE--GNCSAPASEPPGSL 232

  Fly   284 CKSGEGECIPLSWMCDQNKDCRDGSDEAQCNRTCRSDEFTCGNG---RCIQNRFKCDDDDDCGDG 345
            |..|                                 .|.|...   ||:....:||...|||||
Mouse   233 CPGG---------------------------------TFPCSGARSTRCLPVERRCDGTQDCGDG 264

  Fly   346 SDEKNCGEKAKCG------------SNFFACKSGP----CIPNQWVCDGDS--------DCRNGE 386
            |||..|.:.| ||            .:.|....||    |   .|:.|...        :.|.|.
Mouse   265 SDEAGCPDLA-CGRRLGSFYGSFASPDLFGAARGPSDLHC---TWLVDTQDPRRVLLQLELRLGY 325

  Fly   387 DE---------------MQ-----------------------------------NCTVSLLNFCQ 401
            |:               :|                                   |.|..:..:|.
Mouse   326 DDYVQVYEGLGERGDRLLQTLSYRSNHRPVSLEAAQGRLTVAYHARARSAGHGFNATYQVKGYCL 390

  Fly   402 AGEFQC-----SDRIT----CLHKSWVCDGEADCPDGEDESQSNCLKVSCRPDQFQCNDQS--CI 455
            ..|..|     .|..|    |..:...|||...|..|.||  ..|  .:|.|||:.|...|  |.
Mouse   391 PWEQPCGSSEGDDDSTGEQGCFSEPQRCDGWWHCASGRDE--QGC--PACPPDQYPCEGGSGLCY 451

  Fly   456 AGHLTCNGKRDCADGSDEIMCDISATPRTCNATTEFDCGGGLCIPNAKVCNRRKDCPNGEDE 517
            |....||.::.|.||:||..| .|..|.|      |.||..|||.....|:.::||.:|.||
Mouse   452 APADRCNNQKSCPDGADEKNC-FSCQPGT------FHCGTNLCIFETWRCDGQEDCQDGSDE 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR2NP_001097928.1 LDLa 193..224 CDD:197566 13/50 (26%)
LDLa 235..267 CDD:197566 15/31 (48%)
LDLa 277..313 CDD:238060 3/35 (9%)
LDLa 356..388 CDD:197566 10/55 (18%)
LDLa 400..432 CDD:197566 11/40 (28%)
LDLa 442..476 CDD:238060 15/35 (43%)
LDLa 484..517 CDD:197566 11/32 (34%)
FXa_inhibition 527..562 CDD:291342
EGF_CA 564..594 CDD:214542
LY 675..715 CDD:214531
LY 717..760 CDD:214531
LY 763..803 CDD:214531
FXa_inhibition 877..918 CDD:291342
Lrp3NP_001019878.1 CUB 64..177 CDD:238001 18/71 (25%)
LDLa 187..221 CDD:238060 17/35 (49%)
LDLa 233..270 CDD:238060 16/69 (23%)
CUB 275..385 CDD:238001 14/112 (13%)
LDLa 436..472 CDD:238060 15/35 (43%)
LDLa 475..509 CDD:238060 14/38 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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