DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR2 and egf

DIOPT Version :9

Sequence 1:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster
Sequence 2:NP_001352456.1 Gene:egf / 403045 ZFINID:ZDB-GENE-070922-1 Length:1177 Species:Danio rerio


Alignment Length:562 Identity:153/562 - (27%)
Similarity:242/562 - (43%) Gaps:110/562 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   481 TPRT--CNATTEFDCGGGLCIPNAKVCNRRKDCPNGEDEPAGKCG----------------INEC 527
            ||.|  |:..|      |.|:   |||:...|        .|.||                :|||
Zfish   313 TPFTPGCSRHT------GECV---KVCSSHTD--------TGLCGCKDGFTLSKHGNICEDVNEC 360

  Fly   528 SSKNGGCMHQCVNLEVGYRCECHDGYKLGADQHTC----------VDIDE----------CETP- 571
            |..|.||...|.|:...|.|.|.:||.|..|..||          ||.|.          |..| 
Zfish   361 SLWNHGCSLGCENVPGSYFCTCPEGYLLLPDLKTCQENKPCVGKAVDCDHACVHTAQGDMCVCPE 425

  Fly   572 -------------------GICSQVCVNEI-GAFKCECEAGYMRLLKNHTRCKASEGHASLLLAR 616
                               |.|||:||... |.:.|||..|| ::..:...|.|:...|.||.|.
Zfish   426 GSLLNPDGQSCTGCFSADRGGCSQMCVTLYPGRWVCECHPGY-QIQPDGKHCAATGPPADLLFAN 489

  Fly   617 RHDIRKIALDRPEMTSIVNSTKA-ATALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRTVVLTKS 680
            ..|:|||..|......::..... .||:|:...|..::::|...:.|.:|.:||| .|.::::..
Zfish   490 IVDLRKINTDGKLSIKLLEKPGGNITAVDYDPVTNKVYFADKGLKHIERASLDEG-FRELLVSTG 553

  Fly   681 SVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIEGWMYWSDWG 745
            ..:.:.||||||...:|:||:...:|..::..|...::.:.:::..||.|||.|....:||:|.|
Zfish   554 LNSPEALAVDWIQRKLYWTDSGLSSISRSSLNGLDREIFINENIQKPRGIALHPQAQKIYWTDMG 618

  Fly   746 ASPRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRHQVLYSG 810
            ..|.:||:|:|...|.|:::..:..|:|:.:|...:||||.|...:.|.|:|.|||  |:.:.|.
Zfish   619 DRPAVERSGLDKDLREAVVSTGLVSPSGLAVDHGSQRLYWCDMSTSVIESANLDGS--HRRVISQ 681

  Fly   811 EYLRHPFSITTFEDYVYWTDWDKQAVFKANKFNGMDVEPVTATHMLEHPMVVHVYHPYRQPDGVN 875
            ..:..||.|..||:.::.:|.:...:|:.:..:|.:.|.:....:  .|..:.|.||..:| |.:
Zfish   682 NQVDRPFDIAVFENVLWVSDLENHLIFRLDMRSGQNPERLLVDSI--QPAALVVVHPLAKP-GAD 743

  Fly   876 HCQSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMPDGLMCVEDLGIPTVRPTAPMHRTIEQS 940
            .|...||.|:.:|:      .|.....|:|.|...|..||..|                |.|..|
Zfish   744 VCLDGNGGCAQVCV------SRLGLPHCSCHTNHVLSADGKGC----------------RMINAS 786

  Fly   941 SNSTTKLPQDGYSETPVETKTGNNRTDTSNQVHKSDAESEND 982
            .:.::    :|.|...:..||.|:.:.....::.....|:.|
Zfish   787 FSESS----EGGSNDGLRNKTLNDESTPLAMLYTEKMVSDQD 824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR2NP_001097928.1 LDLa 193..224 CDD:197566
LDLa 235..267 CDD:197566
LDLa 277..313 CDD:238060
LDLa 356..388 CDD:197566
LDLa 400..432 CDD:197566
LDLa 442..476 CDD:238060
LDLa 484..517 CDD:197566 9/34 (26%)
FXa_inhibition 527..562 CDD:291342 14/34 (41%)
EGF_CA 564..594 CDD:214542 15/60 (25%)
LY 675..715 CDD:214531 11/39 (28%)
LY 717..760 CDD:214531 15/42 (36%)
LY 763..803 CDD:214531 14/39 (36%)
FXa_inhibition 877..918 CDD:291342 12/40 (30%)
egfNP_001352456.1 NHL 34..>197 CDD:302697
NHL repeat 81..121 CDD:271320
NHL repeat 123..160 CDD:271320
LY 156..197 CDD:214531
vWFA <351..394 CDD:320736 16/42 (38%)
FXa_inhibition 441..476 CDD:317114 12/35 (34%)
LY 506..546 CDD:214531 10/40 (25%)
LY 549..589 CDD:214531 11/39 (28%)
LY 590..629 CDD:214531 14/38 (37%)
LY 634..676 CDD:214531 15/43 (35%)
FXa_inhibition 745..780 CDD:317114 12/40 (30%)
EGF_3 865..901 CDD:315598
EGF_3 907..942 CDD:315598
PHA02887 <959..1058 CDD:333467
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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