DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR2 and LRP1

DIOPT Version :9

Sequence 1:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster
Sequence 2:NP_001260800.2 Gene:LRP1 / 35799 FlyBaseID:FBgn0053087 Length:4752 Species:Drosophila melanogaster


Alignment Length:914 Identity:314/914 - (34%)
Similarity:427/914 - (46%) Gaps:191/914 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 SSIN------SVLNG--NPLKFLNVSGKIG----------------TPLDISLGLSNYCDEKQFQ 199
            :|||      .:|||  ..:..||.||:..                .|::.|.|||      |:.
  Fly  2578 TSINCDANQCKILNGQCEDVCILNKSGQATCHCTQGVLAPDGRRCIAPVNTSCGLS------QYN 2636

  Fly   200 CSTGECIPIRFVCDGSSDCPDHSDERLEECKFTESTCSQEQFRCGNGKCIPRRWVCDRENDCADG 264
            |.:|||||:...||..:.|.|.|||....|.|.:  |.:..|.|.|.:|||:...||.|..|.||
  Fly  2637 CHSGECIPLELTCDNVTHCADGSDEFRSYCIFRQ--CPETHFMCQNHRCIPKEHKCDGEQQCGDG 2699

  Fly   265 SDESTSQCR-------SHTCS------PEEFACKSGEGECIPLSWMCDQNKDCRDGSDEAQC--- 313
            |||:...|:       .|..:      |:.|.|  |.|||||..::||..|||||.|||..|   
  Fly  2700 SDETPLLCKCQSEDIDMHPSNNNTKEMPDMFRC--GSGECIPRKFLCDSLKDCRDFSDEKMCAPI 2762

  Fly   314 -----------------------------------------NRT---CRSDEFTCGNGRCIQNRF 334
                                                     |.|   |...:|.|.:|.||...:
  Fly  2763 PCEKNDMTFVHCGNSTICIMPRWRCDGDPDCPDGTDELDCANHTSLSCDPGQFRCASGNCIAGSW 2827

  Fly   335 KCDDDDDCGDGSDEKNCGEKAKCGSNFFACKSGPCIPNQWVCDGDSDCRNGEDEMQNCTVSLLNF 399
            .||.:.||.|||||.||  :.:|..|.|||.. .|||..|.|||.|||.:|.||...|.   ...
  Fly  2828 HCDGEKDCPDGSDEINC--RTECRHNQFACDK-TCIPASWQCDGKSDCEDGSDEGPQCP---NRP 2886

  Fly   400 CQAGEFQCSDRITCLHKSWVCDGEADCPDG------EDESQSNCLKVSCRPD------------- 445
            |:...|||.....|:.:.||||||.|||.|      |||. ..|..|:..||             
  Fly  2887 CRPHLFQCKSSGRCIPQKWVCDGEKDCPSGLGDEGSEDEG-PQCGGVAHIPDCPPPAHLCTSGLC 2950

  Fly   446 -------------------------------------QFQCNDQSCIAGHLTCNGKRDCADGSDE 473
                                                 ..||.|..||..:.||:||.||.|||||
  Fly  2951 IDSHYVCDGDEDCPGGDDEYEGCVPAFQPHSCPGGSLMHQCQDGLCIFKNQTCDGKPDCGDGSDE 3015

  Fly   474 IMCDISATPRTCNATTEFDCGGGLCIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQC 538
             ...:.|..|.||.|.:|.|..|.||....:|:||.||.:..||..  |.:|||...: .|.|:|
  Fly  3016 -TSSLCAHTRGCNGTDDFRCKNGACIHADLLCDRRNDCADFSDEEL--CNVNECLIPD-ICEHEC 3076

  Fly   539 VNLEVGYRCECHDGYK-LGADQHTCVDIDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTR 602
            .:..|||:|.|..||| |....|.|.|||||:....|||.|:|..|::||.|..|| .|:.:|| 
  Fly  3077 EDKVVGYQCHCRPGYKVLPKSPHLCTDIDECDEQQPCSQTCINTYGSYKCLCAKGY-ALVDHHT- 3139

  Fly   603 CKA-SEGHASLLLARRHDIRKIALDRPEMTS----IVNSTKAATALDFVFRTGMIFWSDV-ATQS 661
            ||| |.....|:.:.|:.||::     :||.    ::|....|.|||:.:.:..::|||| :|..
  Fly  3140 CKATSNVSMELIFSNRYYIRQV-----DMTGNGSILINELSNAVALDYDWDSQCLYWSDVTSTVG 3199

  Fly   662 IYKAPIDEGNDRTVVLTKSSVTS-DGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLD 725
            ..|....:.| :|..|.::.:.: |||||||:..::|:.|....|||::..:|...|||:.:.|.
  Fly  3200 TIKRYCPKEN-KTQTLHQAMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRKVLINEYLR 3263

  Fly   726 IPRSIALDPIEGWMYWSDWGASPRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKL 790
            .||.|||.|.:..::|||||.||.|.:|||||::...||...:.|||.:|:....::|:|.|.:.
  Fly  3264 EPRGIALHPYQQHIFWSDWGDSPHIGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDARE 3328

  Fly   791 NTISSSNYDGSQRHQVLYSG----EYLRHPFSITTFEDYVYWTDWDKQAVFKANKFNGMDVEPVT 851
            :|||.|:.||:....:|...    ..|.|.|:|..:|.::||:||:.:::...:.|||.:...:.
  Fly  3329 DTISVSDLDGNHTRLLLARSINPLLNLHHIFAIAVWEGHIYWSDWETKSIEYCSIFNGQNCTTLI 3393

  Fly   852 ATHMLEHPMVVHVYHPYR--QPDGVNHCQSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMPD 914
            .|  :..||.:.|:||||  ||...|.|.:.|  ||.||:.:|    ..|...|.|||...|..|
  Fly  3394 TT--IHRPMDLRVFHPYRQQQPMSGNPCLAAN--CSTLCVLSP----EEPYYKCMCPTNFILADD 3450

  Fly   915 GLMC 918
            |..|
  Fly  3451 GRTC 3454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR2NP_001097928.1 LDLa 193..224 CDD:197566 12/30 (40%)
LDLa 235..267 CDD:197566 14/31 (45%)
LDLa 277..313 CDD:238060 19/41 (46%)
LDLa 356..388 CDD:197566 16/31 (52%)
LDLa 400..432 CDD:197566 16/37 (43%)
LDLa 442..476 CDD:238060 18/83 (22%)
LDLa 484..517 CDD:197566 13/32 (41%)
FXa_inhibition 527..562 CDD:291342 14/35 (40%)
EGF_CA 564..594 CDD:214542 15/29 (52%)
LY 675..715 CDD:214531 14/40 (35%)
LY 717..760 CDD:214531 23/42 (55%)
LY 763..803 CDD:214531 15/39 (38%)
FXa_inhibition 877..918 CDD:291342 15/40 (38%)
LRP1NP_001260800.2 LDLa 87..118 CDD:197566
LDLa 126..163 CDD:238060
EGF_CA 246..283 CDD:214542
Ldl_recept_b 449..487 CDD:278487
LY 472..513 CDD:214531
LY 817..852 CDD:214531
LDLa 1057..1092 CDD:197566
LDLa 1104..1134 CDD:238060
FXa_inhibition 1289..1317 CDD:291342
LY 1434..1476 CDD:214531
LY 1477..1521 CDD:214531
LY 1533..1567 CDD:214531
LY 1568..1611 CDD:214531
FXa_inhibition 1639..1676 CDD:291342
LY 1794..1838 CDD:214531
LY 2078..2112 CDD:214531
NHL <2082..>2152 CDD:302697
NHL repeat 2082..2120 CDD:271320
FXa_inhibition 2269..2303 CDD:291342
LY 2430..2471 CDD:214531
LY 2475..2517 CDD:214531
LDLa 2630..2661 CDD:238060 15/36 (42%)
LDLa 2671..2702 CDD:238060 14/30 (47%)
LDLa 2727..2759 CDD:238060 19/33 (58%)
LDLa 2773..2802 CDD:238060 0/28 (0%)
LDLa 2810..2844 CDD:238060 15/33 (45%)
LDLa 2848..2878 CDD:238060 16/30 (53%)
LDLa 2887..2916 CDD:197566 14/28 (50%)
LDLa 2938..2969 CDD:197566 0/30 (0%)
LDLa 2989..3015 CDD:197566 14/25 (56%)
LDLa 3030..3061 CDD:238060 12/32 (38%)
EGF_CA 3062..>3091 CDD:214542 11/29 (38%)
EGF_CA 3103..3141 CDD:214542 19/39 (49%)
LY 3212..3254 CDD:214531 14/41 (34%)
LY 3255..3297 CDD:214531 23/41 (56%)
LY 3299..3340 CDD:214531 15/40 (38%)
LY 3354..3389 CDD:214531 12/34 (35%)
LDLa 3458..3490 CDD:238060
LDLa 3499..3533 CDD:238060
LDLa 3582..3616 CDD:238060
LDLa 3621..3652 CDD:197566
LDLa 3663..3697 CDD:238060
LDLa 3702..3736 CDD:238060
LDLa 3776..3808 CDD:197566
LDLa 3818..3849 CDD:197566
LDLa 3860..3894 CDD:238060
NHL 4029..>4158 CDD:302697
NHL repeat 4034..4074 CDD:271320
NHL repeat 4076..4115 CDD:271320
LY 4108..4150 CDD:214531
NHL repeat 4121..4158 CDD:271320
EGF_CA <4386..4414 CDD:238011
EGF_CA 4415..4450 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461687
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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