DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR2 and Lrp6

DIOPT Version :10

Sequence 1:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster
Sequence 2:NP_001388749.1 Gene:Lrp6 / 312781 RGDID:1304749 Length:1613 Species:Rattus norvegicus


Alignment Length:309 Identity:132/309 - (42%)
Similarity:187/309 - (60%) Gaps:10/309 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   612 LLLARRHDIRKI--ALDRPEMTSIVNSTKAATALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRT 674
            ||.|.|.|:|.:  ...:...|.:|...:.|.|:||||..|:|:||||:.::|.:...::.....
  Rat    23 LLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFGHGLIYWSDVSEEAIKRTEFNKTESVQ 87

  Fly   675 VVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIEGWM 739
            .|:....::.||||.||:...:|:||:....||::|.:||:.|||....||.||:|||||..|:|
  Rat    88 NVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFM 152

  Fly   740 YWSDWGASPRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRH 804
            ||:|||..|:||||||||:.|..||..::.||||:|||..:::|||.|.|||.|..||.||:.|.
  Rat   153 YWTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYEERKLYWADAKLNFIHKSNLDGTNRQ 217

  Fly   805 QVLYSGEYLRHPFSITTFEDYVYWTDWDKQAVFKANKFNGMDVEPVTATHMLEHPMVVHVYHPYR 869
            .|:...  |.|||::|.|||.:|||||:..::...||:.|..:..:.:.  :..||.:|.:...|
  Rat   218 AVVKGS--LPHPFALTLFEDTLYWTDWNTHSILACNKYTGEGLREIHSN--IFSPMDIHAFSQQR 278

  Fly   870 QPDGVNHCQSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMPDGLMC 918
            ||:..|.|...||.||||||.:|    ..|...||||||:||:..|..|
  Rat   279 QPNATNPCGIDNGGCSHLCLMSP----VKPFYQCACPTGVKLLESGKTC 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR2NP_001097928.1 LDLa 193..224 CDD:197566
LDLa 235..267 CDD:197566
LDLa 277..313 CDD:238060
LDLa 356..388 CDD:197566
LDLa 400..432 CDD:197566
LDLa 442..476 CDD:238060
LDLa 484..517 CDD:197566
FXa_inhibition 527..562 CDD:464251
EGF_CA 564..594 CDD:214542
LY 675..715 CDD:214531 14/39 (36%)
LY 717..760 CDD:214531 28/42 (67%)
LY 763..803 CDD:214531 21/39 (54%)
Ldl_recept_b 782..828 CDD:459654 22/45 (49%)
Ldl_recept_b 824..866 CDD:459654 12/41 (29%)
FXa_inhibition 877..918 CDD:464251 20/40 (50%)
Lrp6NP_001388749.1 YncE 1..204 CDD:442618 79/180 (44%)
LY 89..127 CDD:214531 13/37 (35%)
Ldl_recept_b 150..191 CDD:459654 25/40 (63%)
LY 175..216 CDD:214531 21/40 (53%)
LY 217..251 CDD:214531 14/35 (40%)
FXa_inhibition 286..323 CDD:464251 20/40 (50%)
LY 353..393 CDD:214531
LY 397..437 CDD:214531
Ldl_recept_b 458..499 CDD:459654
LY 483..524 CDD:214531
LY 525..558 CDD:214531
FXa_inhibition 592..627 CDD:464251
YncE <654..813 CDD:442618
LY 697..739 CDD:214531
LY 827..866 CDD:214531
FXa_inhibition 893..929 CDD:464251
LY 958..998 CDD:214531
YncE <968..1075 CDD:442618
LY 1094..1136 CDD:214531
FXa_inhibition 1207..1243 CDD:464251
LDLa 1249..1285 CDD:238060
LDLa 1288..1322 CDD:238060
LDLa 1326..1360 CDD:238060
Blue background indicates that the domain is not in the aligned region.

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