DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR2 and LpR1

DIOPT Version :10

Sequence 1:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster
Sequence 2:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster


Alignment Length:1124 Identity:691/1124 - (61%)
Similarity:793/1124 - (70%) Gaps:163/1124 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SRSSSSSSGCREPSKTSGFFYSASTHYQSKV-----------QQLISFSFTSSFHLLFITCILSI 82
            |||:|::|   |.:||:   ..::|..:|.|           :||...: .::|:||.:|.:|..
  Fly     5 SRSTSTAS---ETTKTA---IKSTTSSKSPVTFGNLGEKRRAEQLFRCA-CANFNLLLLTLMLGF 62

  Fly    83 SKFCNAAAVNAAHVTAATPTASEIMHNLSGSALLERLKASTLGPTLDQLKHLAPAAANSISPGTG 147
            .|.|.|........:..|||::...||               ..|||:                 
  Fly    63 GKCCTATPTPLNTPSTNTPTSAVSPHN---------------PQTLDE----------------- 95

  Fly   148 SGMGIGMGHFGSSINSVLNGNP-----LKFLNVSGKIGTPLDISLGLSNYCDEKQFQCSTGECIP 207
            ||          |::.|::|..     .|||||||||||||.|...|...||||||||.:|:|||
  Fly    96 SG----------SLSKVIDGKAFINMGFKFLNVSGKIGTPLGIGQSLEAKCDEKQFQCHSGDCIP 150

  Fly   208 IRFVCDGSSDCPDHSDERLEECKFTESTCSQEQFRCGNGKCIPRRWVCDRENDCADGSDEST--- 269
            |||||||.:||.|||||:::||||.|:|||.:|||||||.|||.:|.||:|:||||||||:.   
  Fly   151 IRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCGNGNCIPNKWRCDQESDCADGSDEANELC 215

  Fly   270 ------------------------------------SQCRSHTCSPEEFACKSGEGECIPLSWMC 298
                                                :.||:.||||:|:|||||||:|:||:|||
  Fly   216 MNACPNNEFKCQTVDQCIPRSWLCDGSNDCRDKSDEAHCRARTCSPDEYACKSGEGQCVPLAWMC 280

  Fly   299 DQNKDCRDGSDEAQCNRTCRSDEFTCGNGRCIQNRFKCDDDDDCGDGSDEKNCGEKAKCGS-NFF 362
            ||:|||.|||||..||:|||:||||||||||||.|:|||.|||||||||||.| ....|.| ...
  Fly   281 DQSKDCSDGSDEHNCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSDEKEC-PVVPCDSVAEH 344

  Fly   363 ACKSGPCIPNQWVCDGDSDCRNGEDEMQNCTVSLLNF-CQAGEFQCSDRITCLHKSWVCDGEADC 426
            .|.:|.||..:||||||.||.:|.||.....|:.... |.:.|:||.|||||||.||:|||:.||
  Fly   345 TCTNGACIAKRWVCDGDPDCSDGSDERSCANVTKTTTPCLSHEYQCKDRITCLHHSWLCDGDRDC 409

  Fly   427 PDGEDESQSNCLKVSCRPDQFQCNDQSCIAGHLTCNGKRDCADGSDEIMCDISAT----PRTCNA 487
            |||:||..:||..|:||.|||||.|:|||.|||||||.:||||||||..|.:|.:    ...|||
  Fly   410 PDGDDEHTANCKNVTCRADQFQCGDRSCIPGHLTCNGDKDCADGSDERDCGLSLSLGINQGGCNA 474

  Fly   488 TTEFDCGGGLCIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDG 552
            |:|||||||.|:|.:|||::|||||:||||||||||||||:||||||||||::|:||:.||||:|
  Fly   475 TSEFDCGGGQCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEG 539

  Fly   553 YKLGADQHTCVDIDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKASEGHASLLLARR 617
            |||..|:..|.||:|||.||.|||:||||||.|||||||||||..||||||||||||||||||||
  Fly   540 YKLSPDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKASEGHASLLLARR 604

  Fly   618 HDIRKIALDRPEMTSIVNSTKAATALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRTVVLTKSSV 682
            |||||||||..|||||||||||||||||||||||||||||.|||||||||||||::|||||||||
  Fly   605 HDIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEGNEKTVVLTKSSV 669

  Fly   683 TSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIEGWMYWSDWGAS 747
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   670 TSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIEGWMYWSDWGAS 734

  Fly   748 PRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRHQVLYSGEY 812
            ||||||||||:|||.||:||||||||||||||:||:||||||||.|||:|||||||.||||||||
  Fly   735 PRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLYSGEY 799

  Fly   813 LRHPFSITTFEDYVYWTDWDKQAVFKANKFNGMDVEPVTATHMLEHPMVVHVYHPYRQPDGVNHC 877
            ||||||||||||.|||||||||||||||||.|.|||||||.|||:||||||||||||||||||||
  Fly   800 LRHPFSITTFEDNVYWTDWDKQAVFKANKFTGEDVEPVTAMHMLQHPMVVHVYHPYRQPDGVNHC 864

  Fly   878 QSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMPDGLMCVED-LGIPTV-----------RPT 930
            |||||||||||||||||||||||||||||||||||.|||||||| |.:|.|           ||.
  Fly   865 QSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMVDGLMCVEDPLYLPPVTRPPRARKTKPRPK 929

  Fly   931 APMHR--------------TIEQSSNSTTKLP-------QDGYSETPVETKTGNNRTDTSNQVHK 974
            :|..|              .|......:|:||       .|   :.||:..|         |:.|
  Fly   930 SPRRRLPTGVQVGHADIRIEINDDLQLSTRLPLLPTTFVAD---QRPVKNHT---------QIEK 982

  Fly   975 SDAESEN-DYVEIALHVIASLAGTALVASVIYVV-YRRCT-RAVNSMNFENPVYHK--TTEDHFS 1034
            :...||. |...|||.|||||:|.|::.||:.:: ||.|: |.:||||||||:|.|  |||||||
  Fly   983 TTTPSEQPDSGFIALVVIASLSGFAVLLSVLLLIGYRYCSKRRINSMNFENPIYRKTTTTEDHFS 1047

  Fly  1035 LEKNGTPHIY--AAANDEE 1051
            |.||....||  .:..|||
  Fly  1048 LRKNLPARIYDHTSVMDEE 1066

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR2NP_001097928.1 LDLa 193..224 CDD:197566 24/30 (80%)
LDLa 235..267 CDD:197566 23/31 (74%)
LDLa 277..313 CDD:238060 27/35 (77%)
LDLa 356..388 CDD:197566 15/32 (47%)
LDLa 400..432 CDD:197566 21/31 (68%)
LDLa 442..476 CDD:238060 26/33 (79%)
LDLa 484..517 CDD:197566 23/32 (72%)
FXa_inhibition 527..562 CDD:464251 23/34 (68%)
EGF_CA 564..594 CDD:214542 24/29 (83%)
LY 675..715 CDD:214531 39/39 (100%)
LY 717..760 CDD:214531 41/42 (98%)
LY 763..803 CDD:214531 34/39 (87%)
Ldl_recept_b 782..828 CDD:459654 40/45 (89%)
Ldl_recept_b 824..866 CDD:459654 36/41 (88%)
FXa_inhibition 877..918 CDD:464251 39/40 (98%)
LpR1NP_001097934.2 LDLa 135..167 CDD:197566 24/31 (77%)
LDLa 178..210 CDD:197566 23/31 (74%)
LDLa 219..254 CDD:238060 0/34 (0%)
LDLa 259..295 CDD:238060 27/35 (77%)
LDLa 343..373 CDD:238060 15/29 (52%)
LDLa 383..415 CDD:197566 21/31 (68%)
Ldl_recept_a 423..459 CDD:395011 27/35 (77%)
LDLa 476..504 CDD:197566 19/27 (70%)
FXa_inhibition 514..549 CDD:464251 23/34 (68%)
EGF_CA 551..581 CDD:214542 24/29 (83%)
LY 662..702 CDD:214531 39/39 (100%)
LY 704..747 CDD:214531 41/42 (98%)
LY 749..790 CDD:214531 34/40 (85%)
Ldl_recept_b 769..815 CDD:459654 40/45 (89%)
FXa_inhibition 864..905 CDD:464251 39/40 (98%)

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