DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR2 and F32E10.8

DIOPT Version :9

Sequence 1:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster
Sequence 2:NP_501228.1 Gene:F32E10.8 / 260105 WormBaseID:WBGene00017995 Length:134 Species:Caenorhabditis elegans


Alignment Length:130 Identity:44/130 - (33%)
Similarity:58/130 - (44%) Gaps:33/130 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 CTVSLLNFCQA-GEFQCSDRITCLHKSWVCDGEADCPDGEDESQSNCLK---------------V 440
            ||..|...|.: ...:|.|::||:.|||:|||:.||||..||..:.|||               :
 Worm    19 CTTQLFARCPSLTHIRCFDQLTCIRKSWMCDGKIDCPDHSDELPNICLKRNSYNKLQLQDVSVGL 83

  Fly   441 SCRPDQFQCND-QSCIAGHLTCNGKRDCADGSDEIMCDISATPRTCNATTEFDCGGGLCIPNAKV 504
            .|....|:|.| .||||.:..|:..:||.|||||                ..:|...|..||..|
 Worm    84 KCPSFWFRCTDSSSCIAPNRVCDKYKDCRDGSDE----------------RENCNQPLGTPNTTV 132

  Fly   505  504
             Worm   133  132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR2NP_001097928.1 LDLa 193..224 CDD:197566
LDLa 235..267 CDD:197566
LDLa 277..313 CDD:238060
LDLa 356..388 CDD:197566
LDLa 400..432 CDD:197566 15/32 (47%)
LDLa 442..476 CDD:238060 16/34 (47%)
LDLa 484..517 CDD:197566 5/21 (24%)
FXa_inhibition 527..562 CDD:291342
EGF_CA 564..594 CDD:214542
LY 675..715 CDD:214531
LY 717..760 CDD:214531
LY 763..803 CDD:214531
FXa_inhibition 877..918 CDD:291342
F32E10.8NP_501228.1 LDLa <40..61 CDD:238060 13/20 (65%)
LDLa 84..117 CDD:197566 14/32 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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