DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR2 and Sspo

DIOPT Version :9

Sequence 1:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster
Sequence 2:XP_017177063.1 Gene:Sspo / 243369 MGIID:2674311 Length:5197 Species:Mus musculus


Alignment Length:977 Identity:219/977 - (22%)
Similarity:311/977 - (31%) Gaps:377/977 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 LSNYCDEKQFQCS---------TGECIPIRFVCDG-------SSDCP----DHSDER-------- 225
            ::.|.||    |:         :.|..|::  |:|       .|.||    ||..|.        
Mouse  1289 IATYADE----CARHRHHVRWRSQELCPLQ--CEGGQVYEPCGSTCPPTCHDHHSELRWHCQVIT 1347

  Fly   226 -LEECKFTEST------------CSQE------------QFRCGNGKCIPRRWVCDR-------- 257
             :|.|...|.|            |..|            |..|||..|...:|.|||        
Mouse  1348 CVEGCFCPEGTLLHGGACMKLAACPCEWQGSFFPPGTVLQKDCGNCTCQGSQWHCDRGGAPCEDM 1412

  Fly   258 ENDCADGSDESTSQCRSHTCSPEEFACKSGEGECIPLSWMCDQNKDCRDGSDEAQC-NRTCRSDE 321
            |..||:|.    :.||.:             |.|:||.|:||...||.|||||..| ...|...:
Mouse  1413 EPGCAEGE----TLCREN-------------GHCVPLEWLCDNQDDCGDGSDEEGCATSVCGEGQ 1460

  Fly   322 FTCGNGRCIQNRFKCDDDDDCGDGSDEKNCGEKAKCGSNFFACKSGPCIPNQWVCDGDSDCRNGE 386
            .:|.:|.|:.....||..||||||:||:.|    .|.....||..|.|:|...:|:|..||.:..
Mouse  1461 MSCQSGHCLPLSLICDGQDDCGDGTDEQGC----LCPHGSLACADGRCLPPALLCNGHPDCLDAA 1521

  Fly   387 DEMQNC--TVSLLNFCQAGEFQCSDRITCLHKSWVCDGEADCPDGEDESQSNCLKVS-------- 441
            || ::|  .||    |.:||..|.|. ||:....:|||..|||||.||..|:|...|        
Mouse  1522 DE-ESCLGPVS----CISGEVSCVDG-TCVRTIQLCDGVWDCPDGADEGPSHCSLPSLPTPPGGI 1580

  Fly   442 ------------------------CRPDQFQCNDQSCIAGHLTCNGKRDCADGSDEIMCDISATP 482
                                    |...:||||...|......|:.:.||.|||||:        
Mouse  1581 GQNPSTSSLDTAPSPVGSTSPASPCSLLEFQCNSGECTPRGWRCDQEEDCTDGSDEL-------- 1637

  Fly   483 RTCNATTEFDCGGGL------------CIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCM 535
                     ||||..            |:...::|:....||:|.||....|   |..|.:||..
Mouse  1638 ---------DCGGPCMLYQVPCAHSPHCVSPGQLCDGVTQCPDGSDEDPDVC---EEQSASGGAN 1690

  Fly   536 HQCVNLEVGYRC---ECHDGYKLGADQHTCVDI-------DECE-----TPGI------------ 573
                  ..|..|   .|.||        ||:|.       .:||     .|.:            
Mouse  1691 ------RTGAPCPEFSCPDG--------TCIDFLLVCDGNPDCELADETEPSLDEQGCGAWGSWG 1741

  Fly   574 ----CSQVCVNEIGAFKCECEAGYMRLLKN----------------------------------- 599
                |||.|.:...:....|....:::|:|                                   
Mouse  1742 PWAPCSQTCGSGTRSRNRNCSTSSLQVLQNCPGLQHQSQACFTEACPVDGEWSSWSPWSPCSEPC 1806

  Fly   600 ------HTRCKASEG---HASLLLARRHDIRKIALDRPEMTSIVNSTKAATALDFVFRTGM---I 652
                  |.:|:..:.   ..:||....|..|:.:....|  ..:|:|...   :.||||..   :
Mouse  1807 GGTTTRHRQCRPPQNGGQDCALLPGSTHSTRQTSPCPQE--GCLNATCFG---ELVFRTCAPCPL 1866

  Fly   653 FWSDVATQSIYKAPIDEG--------NDRTVVLTKSSVTS--------DGLAVDWIYNHVYFT-- 699
            ...|::.|:  ..|.|..        .|..|:.|:.....        || |..|....:...  
Mouse  1867 TCDDISGQA--ACPPDRPCSSPGCWCPDGKVLNTEGQCVRPRQCPCLVDG-AHYWPGQRIKMDCQ 1928

  Fly   700 -------DTHKCTIELTNFEGSMGKVLVKDSLDIPR-SIALDPIEGWMYWSDWGASPRIERAGMD 756
                   ..|:|.                     |. ..|:|.  ||..||.|        |...
Mouse  1929 LCFCQDGQPHRCR---------------------PNPECAVDC--GWSSWSPW--------AECL 1962

  Fly   757 GTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRHQVLYS-GEYLRHPFSIT 820
            |...:..:.:..:.||...|....::...:..|.....:...:|.::..::|: ||         
Mouse  1963 GPCSSQSLQWSFRSPNNPRLSGHGRQCRGIHRKARRCQTEACEGCEQWGLMYNVGE--------- 2018

  Fly   821 TFEDYVYWTDWDKQAVFKANKFNGMDVEPVTATHMLEHPMVVHVYHPYRQPDGVNHCQS----VN 881
                                ::.|   .|......| |..:.|. .||..   :..|..    |.
Mouse  2019 --------------------RWRG---GPCMVCECL-HSSITHC-SPYCP---IGSCPQGWVLVE 2055

  Fly   882 G------HCS---------HLCLPAPR-INERSPRISCACPTGLKLMPDGLMCVEDLGIPTVRPT 930
            |      ||:         |:..|||. .:..||:|.....|.: |.|....|...||:..:...
Mouse  2056 GMGESCCHCALPEKNQTVIHMTTPAPAPASAPSPQIGAHLVTYV-LPPTADACYSPLGLAGLPMW 2119

  Fly   931 AP 932
            ||
Mouse  2120 AP 2121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR2NP_001097928.1 LDLa 193..224 CDD:197566 12/50 (24%)
LDLa 235..267 CDD:197566 16/63 (25%)
LDLa 277..313 CDD:238060 14/35 (40%)
LDLa 356..388 CDD:197566 10/31 (32%)
LDLa 400..432 CDD:197566 15/31 (48%)
LDLa 442..476 CDD:238060 14/33 (42%)
LDLa 484..517 CDD:197566 9/44 (20%)
FXa_inhibition 527..562 CDD:291342 8/37 (22%)
EGF_CA 564..594 CDD:214542 9/57 (16%)
LY 675..715 CDD:214531 8/56 (14%)
LY 717..760 CDD:214531 10/43 (23%)
LY 763..803 CDD:214531 5/39 (13%)
FXa_inhibition 877..918 CDD:291342 15/60 (25%)
SspoXP_017177063.1 VWD 229..378 CDD:214566
C8 434..505 CDD:370094
TIL 509..564 CDD:366828
VWD 593..753 CDD:214566
C8 791..863 CDD:214843
TIL 866..919 CDD:366828
VWD 1054..1201 CDD:365869
C8 1245..1311 CDD:370094 5/25 (20%)
TIL 1315..1371 CDD:366828 12/55 (22%)
LDLa 1416..1451 CDD:238060 19/51 (37%)
LDLa 1456..1490 CDD:238060 14/33 (42%)
LDLa 1492..1526 CDD:238060 12/34 (35%)
LDLa 1532..1563 CDD:197566 15/31 (48%)
Ldl_recept_a 1603..1639 CDD:365841 14/52 (27%)
TSP1 1737..1788 CDD:214559 7/50 (14%)
TIL 1857..1908 CDD:366828 11/52 (21%)
TSP1 1952..2005 CDD:214559 10/60 (17%)
FA58C <2142..2262 CDD:330301
LDLa 2275..2309 CDD:238060
LDLa 2414..2448 CDD:238060
LDLa 2471..2505 CDD:238060
TSP1 2565..2617 CDD:214559
TIL 2640..2682 CDD:366828
TSP1 2725..2774 CDD:214559
TSP_1 2841..2889 CDD:365867
TIL 2893..2952 CDD:366828
VWC_out 2954..3001 CDD:214565
TSP1 2994..3045 CDD:214559
TIL 3097..3149 CDD:366828
TSP1 3193..3256 CDD:214559
TSP1 3262..3314 CDD:214559
TIL 3322..3372 CDD:366828
TSP1 3418..>3458 CDD:214559
TSP1 3482..3526 CDD:214559
TIL 3536..3592 CDD:366828
TSP1 3655..3699 CDD:214559
TSP1 3832..3884 CDD:214559
TSP1 3901..3949 CDD:214559
TSP1 3967..4020 CDD:214559
TSP1 4025..4077 CDD:214559
TIL 4080..4135 CDD:366828
TSP1 4180..4230 CDD:214559
TSP1 4274..4325 CDD:214559
TSP1 4389..4440 CDD:214559
TIL 4444..4499 CDD:366828
TSP1 4639..4687 CDD:214559
TIL 4701..4747 CDD:366828
TSP1 4791..4840 CDD:214559
TIL 4842..4896 CDD:366828
TIL 4948..5006 CDD:366828
VWC 5008..5063 CDD:327433
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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