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Protein Alignment LpR2 and Ldlrad3
DIOPT Version :9
Sequence 1: | NP_001097928.1 |
Gene: | LpR2 / 43105 |
FlyBaseID: | FBgn0051092 |
Length: | 1064 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_849217.2 |
Gene: | Ldlrad3 / 241576 |
MGIID: | 2138856 |
Length: | 345 |
Species: | Mus musculus |
Alignment Length: | 123 |
Identity: | 53/123 - (43%) |
Similarity: | 72/123 - (58%) |
Gaps: | 8/123 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 312 QCNRTCRSDEFTCGNGRCIQNRFKCDDDDDCGDGSDEKNCGE-KAKCGSNFFACKSG-PCIPNQW 374
:|| ....|.|.|||||...::||...||.|.||||.|.: |:|||..||.|.|| .||..::
Mouse 28 ECN---IPGNFMCSNGRCIPGAWQCDGLPDCFDKSDEKECPKAKSKCGPTFFPCASGIHCIIGRF 89
Fly 375 VCDGDSDCRNGEDEMQNCTVSLLNFCQAGEFQCSDRITCLHKSWVCDGEADCPDGEDE 432
.|:|..||.:|.|| :|||.:.| .|....:.|.:.: |:.||::|||:.:|.|..||
Mouse 90 RCNGFEDCPDGSDE-ENCTANPL-LCSTARYHCRNGL-CIDKSFICDGQNNCQDNSDE 144
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
LpR2 | NP_001097928.1 |
LDLa |
193..224 |
CDD:197566 |
|
LDLa |
235..267 |
CDD:197566 |
|
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.