DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR2 and Gm19410

DIOPT Version :10

Sequence 1:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster
Sequence 2:XP_006509297.1 Gene:Gm19410 / 100502846 MGIID:5011595 Length:2104 Species:Mus musculus


Alignment Length:863 Identity:277/863 - (32%)
Similarity:397/863 - (46%) Gaps:113/863 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 CSQEQFRCGNGK-CIPRRWVCDRENDCADGSDESTSQCRSHTCSPEEFACKSGEGECIPLSWMCD 299
            |::....|.:|| ||||..:|:.|.||.|||||  ..|......|..|.|..| ..||...:.||
Mouse   871 CARSSVPCQDGKGCIPRESLCNGEADCQDGSDE--KNCSQICHQPGVFQCLDG-SRCIEERYHCD 932

  Fly   300 QNKDCRDGSDEAQCNRTCRSDEFTCGN-GRCIQNRFKCDDDDDCGDGSDEKNCGEKAKCGSNFFA 363
            ..:.|.|||||..|.|........|.| .|||...::||...||.|..||:.|..: ||.|..|.
Mouse   933 GAQHCSDGSDELDCWRPADDCSMHCDNKTRCIPKSWRCDGKPDCLDRRDEQGCFHE-KCSSPEFQ 996

  Fly   364 CKSGPCIPNQWVCDGDSDCRNGEDEMQNCTVSLLNFCQAGEFQCSDRITCLHKSWVCDGEADCPD 428
            |::|.||.:...||||.||.:..|| :.|.|:....|..||.:|.....|:...|:||.:.||.|
Mouse   997 CENGQCISSSLRCDGDRDCLDHSDE-EGCPVAWSLQCPEGEMKCPKSGECVLAEWICDHDVDCKD 1060

  Fly   429 GEDESQSNCLKVSCRPDQFQCN--DQSCIAGHLTCNGKRDCADGSDEIMCDISATPRTCNATTEF 491
            |.||.......:||.|.|:.|:  || |:.....|:|:.||.|||||..|    .|:.|. .:||
Mouse  1061 GTDEKDCGLKVISCGPRQWACDSGDQ-CVPDFWHCDGQSDCRDGSDEAGC----APQKCQ-DSEF 1119

  Fly   492 DCGGGLCIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLG 556
            .|..|.|:..:.||:.|:||.:|.|| .|:|..:.||.  |.|.|.|.....|..|.|..|::|.
Mouse  1120 QCATGACLSFSMVCDGREDCVDGSDE-GGECSSSVCSP--GLCYHSCYQSPTGPVCVCAPGFELE 1181

  Fly   557 ADQHTCVDIDECETPG--ICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKASEGHASLLLARRHD 619
            ::...|.|::||:.|.  .|||.|:|..|::.|.|..||:.....|| |||:.....||::...:
Mouse  1182 SNGQICQDVNECQQPSGQPCSQTCINTEGSYICACHPGYLLGPDGHT-CKATGAEPILLVSIEFN 1245

  Fly   620 IRKIALD--RPEMTSIVNSTKAATALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRTVVLTKSSV 682
            :....|.  :.::.:..:...|..::|:......|||:|...:||....:....|..||   ..:
Mouse  1246 LFLSGLRSLKEDILTTADKNLAIYSVDYDLVDQKIFWADPNAESIRWTSMATKKDGIVV---QGI 1307

  Fly   683 TSDGLAVDWIYNHVYFTDTHK---CTIELTNFEGSMGK------VLVKDSLDIPRSIALDPIEGW 738
            ..|.:.||||..::|:||...   ..|:||    :||:      |::.|.|..|:|:||||:.|.
Mouse  1308 KPDCIGVDWIGRNLYWTDGRAGQILAIQLT----AMGRGKSEYTVVLDDDLIRPQSLALDPLNGL 1368

  Fly   739 MYWSDWGASPRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGS-- 801
            ||||:.|..||||:|||||:.|..::...:..|..|.||.:..:::|.|.|.:.|.|.|.|||  
Mouse  1369 MYWSETGEEPRIEQAGMDGSSRKILVNQGLGHPTSIALDQLSWKIFWSDEKFHCIGSVNLDGSGI 1433

  Fly   802 ---QRHQVLYSGEYLRHPFSITTFEDYVYWTDWDKQAVFKANKFNGMDVEPVTATHMLEHPMVVH 863
               |..|:       :.|||:..|||.|:|:|...:.:..|.|..|.|  ..........|..:.
Mouse  1434 SMMQLTQI-------KSPFSVAVFEDKVFWSDLQTRTIQHAEKMTGKD--RAVLIKRSGQPFGLK 1489

  Fly   864 VYHPYRQPDGVNHCQSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMPDGLMCVEDLGIPTVR 928
            :.|...||...:.|..:.  ||||||.:||     .:.||.||.||.|..||:.||         
Mouse  1490 IMHEVLQPRSSSPCLDIG--CSHLCLLSPR-----AKGSCRCPVGLLLADDGITCV--------- 1538

  Fly   929 PTAPMHRTIEQSSNSTTKLPQDGYSETPVETKTGNNRTDTSNQVHKSDAESENDYVEIALHVIAS 993
                   ::::|......||       .|.|:.......||.|            ..:..|.|..
Mouse  1539 -------SLQESGFVFLVLP-------TVLTQIYLKNLKTSQQ------------TTVPEHRILP 1577

  Fly   994 LAGTALVASVIYVVYRRC-------TRAVNSMNFENP--------VYHKTTEDHFSLE-KNGTPH 1042
            ......:|||.|:|..:.       |..:..:..:.|        :..|.|...|:|: .:|  :
Mouse  1578 FTSVKQLASVDYLVQEKALYLSELNTSDIRLLRMKEPGILSWRRVISVKGTVIDFALDWMSG--N 1640

  Fly  1043 IYAAANDEEAVNPLFKSG 1060
            ||....|...:|..|.:|
Mouse  1641 IYWIDTDNPYINVAFSNG 1658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR2NP_001097928.1 LDLa 193..224 CDD:197566
LDLa 235..267 CDD:197566 15/31 (48%)
LDLa 277..313 CDD:238060 14/35 (40%)
LDLa 356..388 CDD:197566 14/31 (45%)
LDLa 400..432 CDD:197566 12/31 (39%)
LDLa 442..476 CDD:238060 16/35 (46%)
LDLa 484..517 CDD:197566 12/32 (38%)
FXa_inhibition 527..562 CDD:464251 11/34 (32%)
EGF_CA 564..594 CDD:214542 13/31 (42%)
LY 675..715 CDD:214531 13/42 (31%)
LY 717..760 CDD:214531 24/48 (50%)
LY 763..803 CDD:214531 13/44 (30%)
Ldl_recept_b 782..828 CDD:459654 18/50 (36%)
Ldl_recept_b 824..866 CDD:459654 9/41 (22%)
FXa_inhibition 877..918 CDD:464251 18/40 (45%)
Gm19410XP_006509297.1 LDLa <42..63 CDD:238060
LDLa 75..104 CDD:238060
LDLa 150..184 CDD:238060
LDLa 187..218 CDD:197566
FXa_inhibition 226..261 CDD:464251
EGF_CA 263..301 CDD:214542
Ldl_recept_b 429..472 CDD:459654
LY <465..497 CDD:214531
LDLa 871..906 CDD:238060 17/36 (47%)
LDLa 912..946 CDD:238060 14/34 (41%)
LDLa 956..985 CDD:238060 12/28 (43%)
LDLa 990..1024 CDD:238060 15/34 (44%)
LDLa 1032..1067 CDD:238060 14/34 (41%)
LDLa 1074..1109 CDD:238060 16/35 (46%)
LDLa 1114..1145 CDD:238060 12/31 (39%)
FXa_inhibition 1201..1229 CDD:464251 12/28 (43%)
LY 1302..1341 CDD:214531 14/45 (31%)
Ldl_recept_b 1367..1407 CDD:459654 18/39 (46%)
LY 1391..1432 CDD:214531 12/40 (30%)
FXa_inhibition 1507..1537 CDD:464251 17/36 (47%)
LY 1620..1658 CDD:214531 10/39 (26%)
Ldl_recept_b 1639..1679 CDD:459654 7/22 (32%)
FXa_inhibition 1822..1856 CDD:464251
LDLa 1869..1897 CDD:238060
Blue background indicates that the domain is not in the aligned region.

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