DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR2 and lrp2

DIOPT Version :9

Sequence 1:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster
Sequence 2:XP_012826499.2 Gene:lrp2 / 100489914 XenbaseID:XB-GENE-486052 Length:4662 Species:Xenopus tropicalis


Alignment Length:873 Identity:325/873 - (37%)
Similarity:446/873 - (51%) Gaps:70/873 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 CDEKQFQCSTGECIPIRFVCDGSSDCPDHSDERLEECKFTESTCSQEQFRCGNGKCIPRRWVCDR 257
            |....|.|:.|:|:|:...|||..||.|:|||  ..|....:|||...|.||||:|||..|.||.
 Frog  1026 CGSYSFPCANGKCVPVYDRCDGVDDCHDNSDE--ANCGTRNNTCSSRAFTCGNGQCIPLNWRCDG 1088

  Fly   258 ENDCADGSDESTSQCRS-HTCSPEEFACKSGEGECIPLSWMCDQNKDCRDGSDEAQCN--RTCRS 319
            .|||.|.|||.....:. .:||...|.|::  ..|||..|:||.:.||.|||||..||  .||..
 Frog  1089 HNDCVDRSDEQNCPTQGPRSCSSTSFTCQN--NRCIPRIWLCDTDNDCGDGSDELNCNFTSTCEP 1151

  Fly   320 DEFTCGNGRCIQNRFKCDDDDDCGDGSDEKNCGEKAKCGSNFFACKSG-PCIPNQWVCDGDSDCR 383
            .:|.|.:.|||...:.||.|.||.|||||..|  ...|..:.|.|.|| .||...:.|||..||.
 Frog  1152 GQFQCPDHRCIDPSYVCDGDKDCVDGSDEMGC--TYNCSYSEFKCASGDQCISTGYQCDGVFDCN 1214

  Fly   384 NGEDEMQNCTVSLLNFCQAGEFQCSDRITCLHKSWVCDGEADCPDGEDESQSNCLKVSCRPDQFQ 448
            :..||: ||.......|...||||.....|:..:|.|||..||.||.|| .:.|...||.|..|:
 Frog  1215 DHSDEL-NCPTRPAGMCHQNEFQCQSDGACIPSNWECDGHPDCIDGSDE-HNTCPVRSCPPSMFR 1277

  Fly   449 CNDQSCIAGHLTCNGKRDCADGSDEIMCDISATPRTCNATTEFDC-GGGLCIPNAKVCNRRKDCP 512
            |::.:||.....|:|..||.|.|||..|   .||.....:.::.| |..:||..:|||:...|||
 Frog  1278 CDNGNCIYRSWICDGDNDCRDMSDEKDC---PTPPFRCPSWQWQCPGNTICINVSKVCDNTPDCP 1339

  Fly   513 NGEDEPAGKCGINE-------CSSKNGGCMHQCVNLEVGYRCECHDGYKLGADQHTCVDIDECET 570
            ||.|| :..|  ||       |:..|.||.|||:....|.:|.|.:||.|..|..||.||:||.|
 Frog  1340 NGADE-SPLC--NEYQPDQESCTDNNAGCTHQCIQGPFGAQCTCPEGYSLSNDSKTCEDINECLT 1401

  Fly   571 PGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKASEGHASLLL--ARRHDI--RKIALDRPEMT 631
            ||.|||.|.||.|:::|.||.||: |..|...|||: |.|:|||  |.|:.|  ..|......:.
 Frog  1402 PGFCSQTCYNERGSYRCYCEDGYI-LEPNGRTCKAA-GSANLLLLVASRNQIIADNITTQAHNIY 1464

  Fly   632 SIVNSTKAATALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRTVVLTKSSVTSDGLAVDWIYNHV 696
            .::...:...|:||...|..|||||:|...|:.|.:: |.||.|:.......::.:||||:..::
 Frog  1465 PVIRDGRTIVAIDFDSVTNRIFWSDIAQDKIWSAFVN-GTDRKVIFDSGVTVTESIAVDWVGRNL 1528

  Fly   697 YFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIEG--WMYWSDWGASPRIERAGMDGTH 759
            |:||....|||::..:|:...||:.:::..||.:.|||...  .|:|:|||.:||||||.|||..
 Frog  1529 YWTDYVLETIEVSQLDGTHRTVLISENVTNPRGLVLDPRTDAHVMFWTDWGRNPRIERASMDGKM 1593

  Fly   760 RTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRHQVLYSGEYLRHPFSITTFED 824
            ||.|::..:.||||:.:|...||||:.|..|:.|...:|||:.|.|.:.|...|:||.:||.|||
 Frog  1594 RTVIVSNKIYWPNGLAIDYPNKRLYFADAYLDYIDYCDYDGNNRKQAMASDLVLQHPHAITIFED 1658

  Fly   825 YVYWTDWDKQAVFKANKFNGMDVEPVTATHMLEHPMVVHVYHPYRQPDGVNHCQSVNGHCSHLCL 889
            ||||||.....|.:||||:|.:  .....:.:..|:.:...|..:||.|||.|  ....|||:||
 Frog  1659 YVYWTDRYTSRVIRANKFHGGN--QTVMIYNIHQPLGISAVHSVKQPGGVNPC--AFNPCSHICL 1719

  Fly   890 PAPRINERSPRI-SCACPTGLKLMPDGLMCVEDLGIPTVRPTAPMHRTIEQSSNSTTKL-PQDGY 952
                ::...|:. |||||:|..|:.|.:.|..|        ..|....:..|......| |.|..
 Frog  1720 ----LSSIGPKFYSCACPSGWTLVSDSVNCQRD--------EKPFLVVVRDSIIFGMSLNPDDKT 1772

  Fly   953 SETPVETKTGNNRTDTS--------------NQVHKSDAESENDYVEIALHVIASLAGTAL--VA 1001
            ::..|......|..|..              .::|:..::..|..|.....:|.:..|.||  ::
 Frog  1773 NDAMVPVAGIRNGYDVDFDDSEQMIYWIENPGEIHRVKSDGTNRTVFAPAAIIGAPVGLALDWIS 1837

  Fly  1002 SVIYVVYRRCTRAVNSMNFENPVYHKTT 1029
            ..:|....| |:::..:.....|.|:.|
 Frog  1838 GNLYYTNPR-TQSIEVIKLRGEVKHRKT 1864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR2NP_001097928.1 LDLa 193..224 CDD:197566 13/30 (43%)
LDLa 235..267 CDD:197566 19/31 (61%)
LDLa 277..313 CDD:238060 17/35 (49%)
LDLa 356..388 CDD:197566 12/32 (38%)
LDLa 400..432 CDD:197566 14/31 (45%)
LDLa 442..476 CDD:238060 14/33 (42%)
LDLa 484..517 CDD:197566 12/33 (36%)
FXa_inhibition 527..562 CDD:291342 14/34 (41%)
EGF_CA 564..594 CDD:214542 18/29 (62%)
LY 675..715 CDD:214531 12/39 (31%)
LY 717..760 CDD:214531 21/44 (48%)
LY 763..803 CDD:214531 16/39 (41%)
FXa_inhibition 877..918 CDD:291342 15/41 (37%)
lrp2XP_012826499.2 LDLa 33..67 CDD:238060
LDLa 111..145 CDD:238060
LDLa 151..182 CDD:238060
LDLa 186..220 CDD:238060
LDLa 266..300 CDD:238060
EGF_CA 348..385 CDD:214542
NHL 391..618 CDD:302697
LY 503..548 CDD:214531
LY 551..591 CDD:214531
FXa_inhibition 663..704 CDD:405372
LY 776..818 CDD:214531
Ldl_recept_b 838..878 CDD:395012
LY 864..904 CDD:214531
LDLa 1026..1060 CDD:238060 15/35 (43%)
LDLa 1067..1101 CDD:238060 20/33 (61%)
LDLa 1109..1143 CDD:238060 17/35 (49%)
LDLa 1149..1183 CDD:238060 16/33 (48%)
LDLa 1187..1222 CDD:238060 14/35 (40%)
LDLa 1230..1264 CDD:238060 16/34 (47%)
LDLa 1271..1305 CDD:238060 14/33 (42%)
LDLa 1311..1344 CDD:197566 12/32 (38%)
FXa_inhibition 1358..1393 CDD:405372 14/34 (41%)
EGF_CA 1395..1434 CDD:214542 21/39 (54%)
LY 1466..1505 CDD:214531 13/39 (33%)
LY 1506..1548 CDD:214531 12/41 (29%)
LY 1550..1594 CDD:214531 21/43 (49%)
LY 1596..1637 CDD:214531 16/40 (40%)
FXa_inhibition 1714..1745 CDD:405372 14/34 (41%)
LY 1825..1857 CDD:214531 7/32 (22%)
Ldl_recept_b 1888..1932 CDD:395012
LY 1917..1958 CDD:214531
FXa_inhibition 2027..2063 CDD:405372
LY 2187..2230 CDD:214531
LY 2232..2272 CDD:214531
FXa_inhibition 2351..2387 CDD:405372
LY 2463..2505 CDD:214531
Ldl_recept_b 2524..2564 CDD:395012
LY 2550..2590 CDD:214531
Ldl_recept_b 2608..2647 CDD:423042
FXa_inhibition 2660..2697 CDD:405372
LDLa 2705..2737 CDD:238060
LDLa 2746..2780 CDD:238060
LDLa 2785..2822 CDD:238060
LDLa 2826..2859 CDD:197566
LDLa 2868..2900 CDD:197566
LDLa 2910..2942 CDD:197566
LDLa 2953..2993 CDD:238060
LDLa 2998..3032 CDD:238060
LDLa <3046..3068 CDD:197566
LDLa 3080..3114 CDD:238060
FXa_inhibition 3126..3155 CDD:405372
vWFA <3152..3195 CDD:412136
LY 3224..3265 CDD:214531
LY 3267..3309 CDD:214531
Ldl_recept_b 3338..3378 CDD:395012
LY 3363..3404 CDD:214531
LY 3405..3446 CDD:214531
FXa_inhibition 3474..>3502 CDD:405372
LDLa 3517..3549 CDD:238060
LDLa 3558..3589 CDD:197566
LDLa 3598..3630 CDD:197566
LDLa 3639..3671 CDD:197566
LDLa 3724..3759 CDD:238060
LDLa 3764..3798 CDD:238060
LDLa 3802..3834 CDD:197566
LDLa 3847..3879 CDD:238060
LDLa 3890..3920 CDD:197566
LDLa 3933..3967 CDD:238060
LY 4146..4181 CDD:214531
Ldl_recept_b 4202..4242 CDD:395012
LY 4226..4269 CDD:214531
FXa_inhibition 4344..4371 CDD:405372
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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