DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR2 and lrp6

DIOPT Version :10

Sequence 1:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster
Sequence 2:XP_031754428.1 Gene:lrp6 / 100489328 XenbaseID:XB-GENE-481820 Length:1612 Species:Xenopus tropicalis


Alignment Length:330 Identity:143/330 - (43%)
Similarity:203/330 - (61%) Gaps:15/330 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   596 LLKNHTRCKAS---EGHASLLLARRHDIRKI--ALDRPEMTSIVNSTKAATALDFVFRTGMIFWS 655
            ||::...|..|   .....||.|.|.|:|.:  |..:...|.:|:..:.|.|:||||..|:|:||
 Frog     4 LLRSLLICSLSCLLRASPLLLYANRRDLRLVDAAGMKGNSTVVVSGLEDAAAVDFVFFRGLIYWS 68

  Fly   656 DVATQSIYKAPIDE-GNDRTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVL 719
            ||:.::|.:...:: |:...||:: ..::.||||.||:...:|:||:....||::|.:||:.|||
 Frog    69 DVSEEAIKRIDFNKTGSSHDVVIS-GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVL 132

  Fly   720 VKDSLDIPRSIALDPIEGWMYWSDWGASPRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLY 784
            ....||.||:|||||..|:|||:|||..|:||||||||:.|:.||..|:.||||:|||..:::||
 Frog   133 FWQELDQPRAIALDPTRGYMYWTDWGDVPKIERAGMDGSLRSVIIDSDIYWPNGLTLDYDEQKLY 197

  Fly   785 WVDGKLNTISSSNYDGSQRHQVLYSGEYLRHPFSITTFEDYVYWTDWDKQAVFKANKFNGMDVEP 849
            |.|.||:.|..:|.|||.|..|:...  |.|||::|.|.|.:|||||..:::...||:.|.|...
 Frog   198 WADAKLSFIHKANLDGSHRQTVIKGS--LAHPFALTLFGDTIYWTDWTTRSILACNKYTGEDRRE 260

  Fly   850 VTATHMLEHPMVVHVYHPYRQPDGVNHCQSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMPD 914
            |.:.  :..||.:||:...|||:..|.|...||.||||||.:|    ..|...||||||::||.|
 Frog   261 VDSD--IFSPMDIHVFSRLRQPNATNPCAVHNGGCSHLCLMSP----MEPFYQCACPTGVRLMED 319

  Fly   915 GLMCV 919
            |.||:
 Frog   320 GKMCM 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR2NP_001097928.1 LDLa 193..224 CDD:197566
LDLa 235..267 CDD:197566
LDLa 277..313 CDD:238060
LDLa 356..388 CDD:197566
LDLa 400..432 CDD:197566
LDLa 442..476 CDD:238060
LDLa 484..517 CDD:197566
FXa_inhibition 527..562 CDD:464251
EGF_CA 564..594 CDD:214542
LY 675..715 CDD:214531 15/39 (38%)
LY 717..760 CDD:214531 28/42 (67%)
LY 763..803 CDD:214531 21/39 (54%)
Ldl_recept_b 782..828 CDD:459654 20/45 (44%)
Ldl_recept_b 824..866 CDD:459654 15/41 (37%)
FXa_inhibition 877..918 CDD:464251 21/40 (53%)
lrp6XP_031754428.1 Ldl_recept_b 63..104 CDD:459654 14/41 (34%)
LY 89..127 CDD:214531 14/38 (37%)
Ldl_recept_b 150..191 CDD:459654 26/40 (65%)
LY 175..216 CDD:214531 21/40 (53%)
LY 217..258 CDD:214531 16/42 (38%)
FXa_inhibition 286..323 CDD:464251 21/40 (53%)
Vgb 339..569 CDD:443399
FXa_inhibition 592..627 CDD:464251
YncE <654..830 CDD:442618
LY 697..739 CDD:214531
LY 825..866 CDD:214531
FXa_inhibition 893..929 CDD:464251
LY 958..997 CDD:214531
Ldl_recept_b 1068..1109 CDD:459654
LY 1093..1135 CDD:214531
FXa_inhibition 1206..1243 CDD:464251
LDLa 1249..1285 CDD:238060
LDLa 1288..1322 CDD:238060
LDLa 1326..1360 CDD:238060
Blue background indicates that the domain is not in the aligned region.

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