DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LpR2 and egf

DIOPT Version :9

Sequence 1:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster
Sequence 2:NP_001106478.1 Gene:egf / 100127663 XenbaseID:XB-GENE-951823 Length:1051 Species:Xenopus tropicalis


Alignment Length:655 Identity:171/655 - (26%)
Similarity:265/655 - (40%) Gaps:151/655 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   476 CDISATPRTCNATTEFDCGGGLCIPNAKVCNRRKDCPNG----------EDEPAGKCGINECSSK 530
            |.||  .:.|..|.|.|..           |::..|.||          ||       ||||:..
 Frog   323 CSIS--NKHCTKTCEIDAE-----------NQKCHCMNGFVLSSNGRYCED-------INECALW 367

  Fly   531 NGGCMHQCVNLEVGYRCECHDGYKLGADQHTCVDIDECETP------------------------ 571
            |.||...|.|:...|.|.|.:||.|..|..||.|...|.|.                        
 Frog   368 NHGCTLGCENIPGSYFCTCPEGYVLLPDNKTCHDKTPCLTEHIECSHGCVQTTKGPLCTCPEGSV 432

  Fly   572 ----------------GICSQVCV-NEIGAFKCECEAGYMRLLKNHTRCKASEGHASLLLARRHD 619
                            |.||.:|: :..|.::|:|..|| .|..:..:|.||.....|:.|..||
 Frog   433 LSEDGKSCTGCTSPDNGGCSHICIMSGPGTWECDCFPGY-NLQLDRKQCLASGPRPYLMFANVHD 496

  Fly   620 IRKIALDRPEMTSIVNSTKAAT-ALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRTVVLTKSSVT 683
            ||:|..|.....|:::|..... |||:......::::..|.:.|..|.:| |:||..:::....|
 Frog   497 IRRINFDGTNYESVLDSQIGRVFALDYDPVEDRMYFAHTALKCIESANMD-GSDRKKMISGDLST 560

  Fly   684 SDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIEGWMYWSDWGASP 748
            .:||.||.|...:|:||..|..||.::..|...|:|::::...||.|.:.|:...::|:..||:|
 Frog   561 LEGLTVDAINRKLYWTDRGKSCIERSDLNGKYRKILIQENNIQPRGICVHPLAKKLFWTHVGANP 625

  Fly   749 RIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRHQVLYSGEYL 813
            |||.:.::|:.|..||:.|:.||:|||:|.:...:||.|.|.:.|.|:|.|||.|..  :|...:
 Frog   626 RIESSDLEGSEREVIISKDLIWPSGITVDHLTDVIYWCDAKKSVIESANLDGSNRQS--FSQNDV 688

  Fly   814 RHPFSITTFEDYVYWTDWDKQAVFKANKFNGMDVEPVTATHMLEHPMVVHVYHPYRQP------- 871
            .|||:|:.|||:::.:||.:.::.:..|.|..:.  |.....::.|..|.:.||..:|       
 Frog   689 GHPFAISVFEDHLWVSDWVQPSLIRIEKRNTQNW--VRLRGNMQRPSSVVIVHPLAKPVIADDIP 751

  Fly   872 ------DGVN---HCQSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMPDGLMCVEDLGIPTV 927
                  |..|   |.:|.        .|.|.....:...:...|:....:...:|..:|.|    
 Frog   752 LPRKEKDSNNQTAHSESF--------FPGPLSTSNAEMGTREAPSSRNGLLAEIMVSDDSG---- 804

  Fly   928 RPTAPMHRTIEQSSNSTTKLPQDGYSETPVETKTGNNRTDTSNQVHKSDAESENDYVEIALHVIA 992
              ...:|..|    |:.....:||.....:|..|||.|.     .|..|        |.:||:.|
 Frog   805 --CIDIHCDI----NAHCVSSEDGPKCQCLEGFTGNGRL-----CHDID--------ECSLHIAA 850

  Fly   993 ---------------------SLAGTALVASVIYVVYRRCTRAVNSMNFENPVYHKTTEDHFSLE 1036
                                 ...|..|..:.|    ..|:|..::.. ||.|...|..::....
 Frog   851 CNPHQTECIDTEGGYICKCKYGYIGNGLQCTDI----DECSRGTHTCG-ENAVCTNTEGNYTCTC 910

  Fly  1037 KNGTP 1041
            .||.|
 Frog   911 TNGFP 915

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR2NP_001097928.1 LDLa 193..224 CDD:197566
LDLa 235..267 CDD:197566
LDLa 277..313 CDD:238060
LDLa 356..388 CDD:197566
LDLa 400..432 CDD:197566
LDLa 442..476 CDD:238060 171/655 (26%)
LDLa 484..517 CDD:197566 9/42 (21%)
FXa_inhibition 527..562 CDD:291342 13/34 (38%)
EGF_CA 564..594 CDD:214542 11/70 (16%)
LY 675..715 CDD:214531 13/39 (33%)
LY 717..760 CDD:214531 14/42 (33%)
LY 763..803 CDD:214531 19/39 (49%)
FXa_inhibition 877..918 CDD:291342 4/40 (10%)
egfNP_001106478.1 LY 152..194 CDD:214531
vWFA <346..398 CDD:320736 20/58 (34%)
FXa_inhibition 412..440 CDD:317114 0/27 (0%)
FXa_inhibition 447..480 CDD:317114 10/33 (30%)
LY 508..550 CDD:214531 10/42 (24%)
LY 554..593 CDD:214531 13/38 (34%)
Ldl_recept_b 615..654 CDD:278487 17/38 (45%)
LY 638..680 CDD:214531 19/41 (46%)
EGF_3 810..838 CDD:315598 9/36 (25%)
EGF_3 851..880 CDD:315598 2/28 (7%)
EGF_3 886..>914 CDD:315598 7/28 (25%)
PHA02887 <927..>967 CDD:333467
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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