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Protein Alignment RpL27 and RPL6B
DIOPT Version :9
Sequence 1: | NP_001262966.1 |
Gene: | RpL27 / 43103 |
FlyBaseID: | FBgn0039359 |
Length: | 135 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_013553.1 |
Gene: | RPL6B / 851169 |
SGDID: | S000004440 |
Length: | 176 |
Species: | Saccharomyces cerevisiae |
Alignment Length: | 122 |
Identity: | 31/122 - (25%) |
Similarity: | 51/122 - (41%) |
Gaps: | 29/122 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGT-----PEKPFGHALVAGIDRYPRKVTKKM--- 57
:|..:..|.::|:|:||:.|::.:.:|..:|.| |.|..|..|.....||....:.|:
Yeast 30 LRASLVPGTVLILLAGRFRGKRVVYLKHLEDNTLLVTGPFKVNGVPLRRVNARYVIATSTKVSVE 94
Fly 58 ------------GKNKLKKKSKVKPFLKSLNYNHLMPTRYTAHDISFEKLSPKDLKD 102
.|.||.||.| |..| |.|.:.| .:|..|::..:.:.|
Yeast 95 GVNVEKFNVEYFAKEKLTKKEK-----KEAN---LFPEQQT-KEIKTERVEDQKVVD 142
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
RpL27 | NP_001262966.1 |
KOW |
1..135 |
CDD:412330 |
31/122 (25%) |
RPL6B | NP_013553.1 |
KOW_RPL6 |
26..176 |
CDD:240520 |
31/122 (25%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG2163 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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